Modeling the C. elegans nematode and its environment using a particle system

被引:5
作者
Ronkko, Mauno [1 ]
Wong, Garry [2 ,3 ]
机构
[1] Univ Kuopio, Dept Comp Sci, FIN-70211 Kuopio, Finland
[2] Univ Kuopio, Dept Biosci, AI Virtanen Inst Mol Sci, FIN-70211 Kuopio, Finland
[3] Univ Kuopio, Dept Neurobiol, AI Virtanen Inst Mol Sci, FIN-70211 Kuopio, Finland
关键词
Caenorhabditis elegans; particle systems; emergent dynamics; environmental modeling; computer simulation;
D O I
10.1016/j.jtbi.2008.03.028
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
A particle system, as understood in computer science, is a novel technique for modeling living organisms in their environment. Such particle systems have traditionally been used for modeling the complex dynamics of fluids and gases. In the present study, a particle system was devised to model the movement and feeding behavior of the nematode Caenorhabditis elegans in three different virtual environments: gel, liquid, and soil. The results demonstrate that distinct movements of the nematode can be attributed to its mechanical interactions with the virtual environment. These results also revealed emergent properties associated with modeling organisms within environment-based systems. (C) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:316 / 322
页数:7
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