Computational analyses of TBC protein family in eukaryotes

被引:8
|
作者
Gao, Xinjiao
Jin, Changjiang
Xue, Yu [1 ]
Yao, Xuebiao
机构
[1] Hefei Natl Lab Phys Sci Microscale, Lab Cellular Dynam, Hefei 230027, Anhui, Peoples R China
[2] Univ Sci & Technol China, Hefei 230027, Anhui, Peoples R China
来源
PROTEIN AND PEPTIDE LETTERS | 2008年 / 15卷 / 05期
关键词
TBC domain; phylogenetic tree; USP6; polarized exocytosis; cell cycle; cytokinesis;
D O I
10.2174/092986608784567483
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tre-2/Bub2/Cdc16 domain-containing proteins (TBC proteins) participate in wide range cellular processes. With computational approaches, 137 non-redundant TBC proteins from five model organisms were identified and classified into 13 subfamilies base on molecular evolutionary tree. This phylogenetic analysis provides useful functional annotation of newly-identified TBC proteins and guides for further experimentation.
引用
收藏
页码:505 / 509
页数:5
相关论文
共 50 条
  • [21] Metagenome and Metatranscriptome Analyses Using Protein Family Profiles
    Zhong, Cuncong
    Edlund, Anna
    Yang, Youngik
    McLean, Jeffrey S.
    Yooseph, Shibu
    PLOS COMPUTATIONAL BIOLOGY, 2016, 12 (07)
  • [22] A platform for integrating threading results with protein family analyses
    Pazos, F
    Rost, B
    Valencia, A
    BIOINFORMATICS, 1999, 15 (12) : 1062 - 1063
  • [23] Initiation of protein biosynthesis in eukaryotes
    Merrick, WC
    BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, 2003, 31 (06) : 378 - 385
  • [24] Genome and protein evolution in eukaryotes
    Copley, RR
    Letunic, I
    Bork, P
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2002, 6 (01) : 39 - 45
  • [25] Protein carboxyl methylation in eukaryotes
    Aswad, D. W.
    CURRENT OPINION IN CELL BIOLOGY, 1989, 1 (06) : 1182 - 1187
  • [26] INITIATION OF PROTEIN SYNTHESIS IN EUKARYOTES
    GHOSH, K
    GRISHKO, A
    GHOSH, HP
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1971, 42 (03) : 462 - +
  • [27] PATHWAYS OF PROTEIN SECRETION IN EUKARYOTES
    KELLY, RB
    SCIENCE, 1985, 230 (4721) : 25 - 32
  • [28] Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes
    Khafif, Mehdi
    Cottret, Ludovic
    Balague, Claudine
    Raffaele, Sylvain
    BMC BIOINFORMATICS, 2014, 15
  • [29] Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes
    Mehdi Khafif
    Ludovic Cottret
    Claudine Balagué
    Sylvain Raffaele
    BMC Bioinformatics, 15
  • [30] PROTEIN-MEDIATED PROTEIN MATURATION IN EUKARYOTES
    HAAS, IG
    FEBS LETTERS, 1995, 369 (01) : 72 - 75