Solvation Thermodynamics of Solutes in Water and Ionic Liquids Using the Multiscale Solvation-Layer Interface Condition Continuum Model

被引:4
作者
Rahimi, Ali Mehdizadeh [1 ]
Jamali, Safa [1 ]
Bardhan, Jaydeep P. [2 ]
Lustig, Steven R. [3 ]
机构
[1] Northeastern Univ, Dept Mech & Ind Engn, Boston, MA 02115 USA
[2] Pacific Northwest Natl Lab, Richland, WA 99354 USA
[3] Northeastern Univ, Dept Chem Engn, Boston, MA 02115 USA
关键词
HYDRATION FREE-ENERGIES; MEAN SPHERICAL APPROXIMATION; SOLVENT STRUCTURE; EXPLICIT SOLVENT; COSMO-SAC; ELECTROSTATICS; POLAR; PROTEIN; ELECTROLYTES; SIMULATION;
D O I
10.1021/acs.jctc.2c00248
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Molecular assembly processes are generally driven by thermodynamic properties in solutions. Atomistic modeling can be very helpful in designing and understanding complex systems, except that bulk solvent is very inefficient to treat explicitly as discrete molecules. In this work, we develop and assess two multiscale solvation models for computing solvation thermodynamic properties. The new SLIC/CDC model combines continuum solvent electrostatics based on the solvent layer interface condition (SLIC) with new statistical thermodynamic models for hydrogen bonding and nonpolar modes: cavity formation, dispersion interactions, combinatorial mixing (CDC). Given the structures of 500 solutes, the SLIC/CDC model predicts Gibbs energies of solvation in water with an average accuracy better than 1 kcal/mol, when compared to experimental measurements, and better than 0.8 kcal/mol, when compared to explicit-solvent molecular dynamics simulations. The individual SLIC/CDC energy mode values agree quantitatively with those computed from explicitsolvent molecular dynamics. The previously published SLIC/SASA multiscale model combines the SLIC continuum electrostatic model with the solvent-accessible surface area (SASA) nonpolar energy mode. With our new, improved parametrization method, the SLIC/SASA model now predicts Gibbs energies of solvation with better than 1.4 kcal/mol average accuracy in aqueous systems, compared to experimental and explicit-solvent molecular dynamics, and better than 1.6 kcal/mol average accuracy in ionic liquids, compared to explicit-solvent molecular dynamics. Both models predict solvation entropies, and are the first implicit-solvation models capable of predicting solvation heat capacities.
引用
收藏
页码:5539 / 5558
页数:20
相关论文
共 101 条
[41]  
Jakalian A., 2000, AM1 BCC MODEL METHOD, V21
[42]   FREE-ENERGIES OF HYDRATION OF SOLUTE MOLECULES .1. IMPROVEMENT OF THE HYDRATION SHELL-MODEL BY EXACT COMPUTATIONS OF OVERLAPPING VOLUMES [J].
KANG, YK ;
NEMETHY, G ;
SCHERAGA, HA .
JOURNAL OF PHYSICAL CHEMISTRY, 1987, 91 (15) :4105-4109
[43]  
Klotz, 2019, THESIS RICE U
[44]   Adapting Poisson-Boltzmann to the self-consistent mean field theory: Application to protein side-chain modeling [J].
Koehl, Patrice ;
Orland, Henri ;
Delarue, Marc .
JOURNAL OF CHEMICAL PHYSICS, 2011, 135 (05)
[45]   Beyond the Poisson-Boltzmann Model: Modeling Biomolecule-Water and Water-Water Interactions [J].
Koehl, Patrice ;
Orland, Henri ;
Delarue, Marc .
PHYSICAL REVIEW LETTERS, 2009, 102 (08)
[46]   FREE-ENERGY CALCULATIONS - APPLICATIONS TO CHEMICAL AND BIOCHEMICAL PHENOMENA [J].
KOLLMAN, P .
CHEMICAL REVIEWS, 1993, 93 (07) :2395-2417
[47]   The shape of the nonlocal dielectric function of polar liquids and the implications for thermodynamic properties of electrolytes: A comparative study [J].
Kornyshev, AA ;
Sutmann, G .
JOURNAL OF CHEMICAL PHYSICS, 1996, 104 (04) :1524-1544
[48]   Competitive binding of Mg2+, Ca2+, Na+, and K+ ions to DNA in oriented DNA fibers:: Experimental and Monte Carlo simulation results [J].
Korolev, N ;
Lyubartsev, AP ;
Rupprecht, A ;
Nordenskiöld, L .
BIOPHYSICAL JOURNAL, 1999, 77 (05) :2736-2749
[49]   Why are ionic liquids liquid? : A simple explanation based on lattice and solvation energies [J].
Krossing, Ingo ;
Slattery, John M. ;
Daguenet, Corinne ;
Dyson, Paul J. ;
Oleinikova, Alla ;
Weingaertner, Hermann .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (41) :13427-13434
[50]   The free energy of hydration of gaseous ions, and the absolute potential of the normal calomel electrode [J].
Latimer, WM ;
Pitzer, KS ;
Slansky, CM .
JOURNAL OF CHEMICAL PHYSICS, 1939, 7 (02) :108-111