Preliminary study on genetic diversity in Moehringia jankae Griseb. ex Janka based on inter-simple sequence repeat (ISSR) markers

被引:0
|
作者
Zhelyazkova, Mariya [1 ]
Georgieva, Svetlana [1 ]
Kostova, Milena [2 ]
Gencheva, Deyana [1 ]
Grozeva, Neli [3 ]
机构
[1] Trakia Univ, Fac Agr, Dept Genet Breeding & Reprod, Stara Zagora 6000, Bulgaria
[2] Agr Univ, Dept Genet & Plant Breeding, Fac Agron, Plovdiv 6000, Bulgaria
[3] Trakia Univ, Fac Agr, Dept Biol & Aquaculture, Stara Zagora 6000, Bulgaria
关键词
Moehringia jankae; genetic diversity; inter-simple sequence; (ISSR) markers; AFLP MARKERS; EST-SSR; RAPD; CARYOPHYLLACEAE; HETEROZYGOSITY; PHYLOGENY; SYSTEMS;
D O I
暂无
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Genetic diversity among eleven natural populations of the Moehringia jankae species, Caryophyllaceae family, spread in the Sinite Kamani Natural Park in Bulgaria was assessed by inter-simple sequence repeats (ISSR) markers. A total of 68 loci were identified by using 5 selected IS SR primers, of which 59 are polymorphic and 9 - monomorphic. Presences of 3 specific ISSR bands were reported in the Mj1, Mj5 and Mj9 population. For the primers used, mean values of the polymorphic information content (0.64), effective multiplex ratio (4.53), resolving power (27.66) and marker index (2.84) have been calculated. Shannon's information index (I = 0.226), expected (He = 0.149) and unbiased expected (uH = 0.165) heterozygosity, estimated based on molecular characteristics demonstrate a significant level of intra-species genetic diversity of M. jankae. Cluster analysis, Principal component analysis (PCA) and Principal coordinate analysis (PCoA) divide the studied plant populations into 2 main clusters - first (A) comprises Mj7, Mj8 and Mj10, and Mj1, Mj11, Mj9, second one (B) consists of 2 subclusters, too with Mj5 and Mj6 being in the first one, and Mj2, Mj4 and Mj3 in the second one. The current data complement the studies in the area of genetic resources, therefore they could be included in conservation programs for protection of rare and endangered plant species.
引用
收藏
页码:148 / 157
页数:10
相关论文
共 50 条
  • [11] Genetic Diversity Analysis Among Populations of Mink from China by Inter-simple Sequence Repeat(ISSR) Markers
    Yang Hong-yan
    Fu Jing
    Ning Fang-yong
    Du Zhi-heng
    Bai Xiu-juan
    JournalofNortheastAgriculturalUniversity(EnglishEdition), 2013, 20 (03) : 47 - 54
  • [12] Genetic Diversity of Kenaf (Hibiscus cannabinus) Evaluated by Inter-Simple Sequence Repeat (ISSR)
    Liwu Zhang
    Aiqing Li
    Xiaofei Wang
    Jiantang Xu
    Guangqing Zhang
    Jianguang Su
    Jianmin Qi
    Chunyun Guan
    Biochemical Genetics, 2013, 51 : 800 - 810
  • [13] Revealing genetic diversity of tulips in Turkey with inter-simple sequence repeat markers
    Hacioglu, Burcu Tarikahya
    Eker, Ismail
    GENETIC RESOURCES AND CROP EVOLUTION, 2024, 71 (03) : 1025 - 1034
  • [14] Revealing genetic diversity of tulips in Turkey with inter-simple sequence repeat markers
    Burcu Tarikahya Hacioğlu
    İsmail Eker
    Genetic Resources and Crop Evolution, 2024, 71 : 1025 - 1034
  • [15] Diversity Analysis of Polyporus umbellatus in China Using Inter-simple Sequence Repeat (ISSR) Markers
    Liu, Meng-Meng
    Xing, Yong-Mei
    Guo, Shun-Xing
    BIOLOGICAL & PHARMACEUTICAL BULLETIN, 2015, 38 (10) : 1512 - 1517
  • [16] Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity
    Zhang, Xiao-Gang
    Han, Ting
    He, Zhi-Gao
    Zhang, Qiao-Yan
    Zhang, Lei
    Rahman, Khalid
    Qin, Lu-Ping
    JOURNAL OF NATURAL MEDICINES, 2012, 66 (01) : 241 - 247
  • [17] Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity
    Xiao-Gang Zhang
    Ting Han
    Zhi-Gao He
    Qiao-Yan Zhang
    Lei Zhang
    Khalid Rahman
    Lu-Ping Qin
    Journal of Natural Medicines, 2012, 66 : 241 - 247
  • [18] Genetic diversity on the tropical rare wood species of Dalbergia in Vietnam revealed by inter-simple sequence repeat (ISSR) markers
    Dinh Thi Phong
    Vu Thi Thu Hien
    Tran Thi Viet Thanh
    Nguyen Tuong Van
    Nguyen Quoc Binh
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (55): : 11397 - 11408
  • [19] Evaluating the genetic diversity of Erythropalum scandens based on using inter-simple sequence repeat markers
    Yang, Tianwei
    Zhang, Xiangjun
    Huang, Shiyu
    Gao, Manrong
    Li, Ting
    Zhang, Shangwen
    GENETIC RESOURCES AND CROP EVOLUTION, 2023, 70 (08) : 2377 - 2390
  • [20] Molecular characterization of Jatropha genetic resources through inter-simple sequence repeat (ISSR) markers
    Kumar, R. Senthil
    Parthiban, K. T.
    Rao, M. Govinda
    MOLECULAR BIOLOGY REPORTS, 2009, 36 (07) : 1951 - 1956