Thermodynamically, high-pressure (> 10's of MPa) has a potentially vastly superior effect on reactions and their rates within metabolic processes than temperature. Thus, it might be expected that changes in the pressure experienced by living organisms would have effects on the products of their metabolism. To examine the potential for modification of metabolic pathways based on thermodynamic principles we have performed simple molecular dynamics simulations, in vacuo and in aquo on the metabolites synthesized by recombinant polyketide synthases (PKS). We were able to determine, in this in silico study, the volume changes associated with each reaction-step along the parallel PKS pathways. Results indicate the importance of explicitly including the solvent in the simulations. Furthermore, the addition of solvent and high pressure reveals that high pressure may have a beneficial effect on certain pathways over others. Thus, the future looks bright for pressure driven novel secondary metabolite discoveries, and their sustained and efficient production via metabolic engineering. (C) 2003 Elsevier Science B.V. All rights reserved.
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Jeong, Yu Jeong
Woo, Su Gyeong
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Woo, Su Gyeong
An, Chul Han
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Chungnam Natl Univ, Dept Biosci & Biotechnol, Taejon 305764, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
An, Chul Han
Jeong, Hyung Jae
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Jeong, Hyung Jae
Hong, Young-Soo
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KRIBB, Chem Biol Res Ctr, Ochang 363883, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Hong, Young-Soo
Kim, Young-Min
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Chonnam Natl Univ, Dept Food Sci & Technol, Kwangju 500757, South Korea
Chonnam Natl Univ, Funct Food Res Ctr, Kwangju 500757, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Kim, Young-Min
Ryu, Young Bae
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Ryu, Young Bae
Rho, Mun-Chual
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Rho, Mun-Chual
Lee, Woo Song
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea
Lee, Woo Song
Kim, Cha Young
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KRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South KoreaKRIBB, Ecofriendly Biomat Res Ctr, Jeongeup 580185, South Korea