Genetic variants in the vitamin D receptor (VDR) gene were recently associated with asthma. The biological mechanisms explaining this association are unknown but are likely to involve many cell types given the pleiotropic effect of its ligand, 1 alpha,25-dihydroxy-vitamin D3 [1 alpha,25(OH)(2)D-3]. Considering the prominent role of bronchial smooth muscle cells (BSMCs) in the pathogenesis of asthma, experiments were conducted to explore the gene regulatory effects of 1 alpha,25(OH)(2)D-3 in these cells. Using RT-PCR and Western blot, we showed that VDR is present both at the mRNA transcript and protein levels in human BSMCs. The functionality of the receptor was then demonstrated by showing a > 200-fold change in the expression of the 24-hydroxylase (CYP24A1) gene following 1 alpha,25(OH)(2)D-3 stimulation. Microarray experiments were then performed to identify differentially regulated genes and pathways in BMSCs treated or not with 1 alpha,25(OH)(2)D-3. A total of 729 probe sets on the U133 plus 2.0 Affymetrix GeneChip showed fold-change differences above the 1.5 threshold using the Robust Multichip Average intensities. This corresponds to 231 unique genes that were upregulated and 215 unique genes that were down-regulated following 1 alpha,25(OH)(2)D-3 stimulation. A high similarity between microarray and real-time PCR results was observed for 13 random genes, with a concordance correlation coefficient of 0.91. Real-time PCR was also performed to confirm the regulation of asthma candidate genes. To identify the biological relevance of this regulation, biological pathways analyses were performed. The most significant network of upregulated genes included genes involved in morphogenesis, cell growth, and survival as well as genes encoding structural
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Dahlquist, KD
Salomonis, N
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机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Salomonis, N
Vranizan, K
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机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Vranizan, K
Lawlor, SC
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机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Lawlor, SC
Conklin, BR
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Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USAUniv Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Doniger, SW
Salomonis, N
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h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Salomonis, N
Dahlquist, KD
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Dahlquist, KD
Vranizan, K
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Vranizan, K
Lawlor, SC
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Lawlor, SC
Conklin, BR
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h-index: 0
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Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USAUniv Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
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Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
Dusso, AS
Brown, AJ
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Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
Brown, AJ
Slatopolsky, E
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Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
机构:Univ Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USA
Hakonarson, H
Grunstein, MM
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h-index: 0
机构:
Univ Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USAUniv Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USA
机构:
Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England
Hewitt, KN
Walker, EA
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h-index: 0
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Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England
Walker, EA
Stewart, PM
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h-index: 0
机构:
Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Dahlquist, KD
Salomonis, N
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Salomonis, N
Vranizan, K
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Vranizan, K
Lawlor, SC
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Lawlor, SC
Conklin, BR
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USAUniv Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Doniger, SW
Salomonis, N
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Salomonis, N
Dahlquist, KD
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Dahlquist, KD
Vranizan, K
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Vranizan, K
Lawlor, SC
论文数: 0引用数: 0
h-index: 0
机构:Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
Lawlor, SC
Conklin, BR
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USAUniv Calif San Francisco, Gladstone Inst Cardiovasc Dis, San Francisco, CA 94141 USA
机构:
Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
Dusso, AS
Brown, AJ
论文数: 0引用数: 0
h-index: 0
机构:
Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
Brown, AJ
Slatopolsky, E
论文数: 0引用数: 0
h-index: 0
机构:
Washington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USAWashington Univ, Sch Med, Dept Internal Med, Div Renal, Campus Box 8126,660 S Euclid Ave, St Louis, MO 63110 USA
机构:Univ Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USA
Hakonarson, H
Grunstein, MM
论文数: 0引用数: 0
h-index: 0
机构:
Univ Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USAUniv Penn, Abramsons Pediat Res Ctr, Childrens Hosp Philadelphia, Div Pulm Med,Joseph Stokes Jr Res Inst,Sch Med, Philadelphia, PA 19104 USA
机构:
Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England
Hewitt, KN
Walker, EA
论文数: 0引用数: 0
h-index: 0
机构:
Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England
Walker, EA
Stewart, PM
论文数: 0引用数: 0
h-index: 0
机构:
Univ Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, EnglandUniv Birmingham, Inst Biomed Res, Div Med Sci, Birmingham B15 2TT, W Midlands, England