Detection, quantification and identification of fungal extracellular laccases using polyclonal antibody and mass spectrometry

被引:14
作者
Kellner, Harald
Jehmlich, Nico
Benndorf, Dirk
Hoffmann, Ralf
Ruehl, Martin
Hoegger, Patrik J.
Majcherczyk, Andrzej
Kuees, Ursula
von Bergen, Martin
Buscot, Francois
机构
[1] UFZ Helmholtz Ctr Environm Res, Dept Soil Ecol, D-06120 Halle, Germany
[2] UFZ Helmholtz Ctr Environm Res, Dept Proteom, D-04318 Leipzig, Germany
[3] Univ Gottingen, Inst Forest Bot, Sect Mol Wood Biotechnol, D-37077 Gottingen, Germany
[4] Univ Leipzig, Inst Bot, D-04103 Leipzig, Germany
[5] Univ Leipzig, Fac Chem & Mineral, Ctr Biotechnol & Biomed, D-04103 Leipzig, Germany
关键词
copper binding region; basidiomycetes; native-PAGE; SDS-PAGE; Western blot; tandem mass spectrometry;
D O I
10.1016/j.enzmictec.2007.06.002
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
This study presents a combined method to analyze extracellular fungal laccases using a new anti-laccase antibody together with the identification of tryptic laccase peptides by mass spectrometry (nanoLC-ESI-MS/MS). The polyclonal anti-laccase antibody LccCbr2 was raised against peptides designed from the copper binding region 11 of fungal laccases using in silico data obtained from GenBank database. As a consequence, detection requires denaturation of the enzymes due to the stable conformation of the copper binding region II. The specificity of the antibody was shown with denatured laccase Lcc1 of Coprinopsis cinerea and laccase of Hypholoma fasciculare. LccCbr2 detected amounts as low as 5 ng of highly purified laccase, indicating a possible use of the antibody for quantification of laccase proteins. Denatured extracellular laccases from culture supernatants of the basidiomycetes C. cinerea, H. fasciculare, Lentinula edodes, Mycena sp., Piriformospora indica, Pleurotus cornucopiae, Pleurotus ostreatus, Pycnoporus cinnabarinus, Trametes versicolor and furthermore the ascomycete Verpa conica were detected with apparent molecular masses between 60 and 70 kDa by LccCbr2. The identity of extracellular laccases from C cinerea, H. fasciculare, P ostreatus, P. cinnabarinus and T versicolor were verified by tryptic peptides using nanoLC-ESI-MS/MS. (C) 2007 Elsevier Inc. All rights reserved.
引用
收藏
页码:694 / 701
页数:8
相关论文
共 45 条
[1]   Fungal laccases - occurrence and properties [J].
Baldrian, P .
FEMS MICROBIOLOGY REVIEWS, 2006, 30 (02) :215-242
[2]   Pseudomonas putida KT2440 responds specifically to chlorophenoxy herbicides and their initial metabolites [J].
Benndorf, Dirk ;
Thiersch, Markus ;
Loffhagen, Norbert ;
Kunath, Christfried ;
Harms, Hauke .
PROTEOMICS, 2006, 6 (11) :3319-3329
[3]   LACCASE-MEDIATED DETOXIFICATION OF PHENOLIC-COMPOUNDS [J].
BOLLAG, JM ;
SHUTTLEWORTH, KL ;
ANDERSON, DH .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1988, 54 (12) :3086-3091
[4]   Laccases: structure, reactions, distribution [J].
Claus, H .
MICRON, 2004, 35 (1-2) :93-96
[5]   De novo peptide sequencing via tandem mass spectrometry [J].
Dancík, V ;
Addona, TA ;
Clauser, KR ;
Vath, JE ;
Pevzner, PA .
JOURNAL OF COMPUTATIONAL BIOLOGY, 1999, 6 (3-4) :327-342
[6]   Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR [J].
Dsouza, TM ;
Boominathan, K ;
Reddy, CA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (10) :3739-3744
[7]   Crystal structure of the type-2 Cu depleted laccase from Coprinus cinereus at 2.2 Å resolution [J].
Ducros, V ;
Brzozowski, AM ;
Wilson, KS ;
Brown, SH ;
Ostergaard, P ;
Schneider, P ;
Yaver, DS ;
Pedersen, AH ;
Davies, GJ .
NATURE STRUCTURAL BIOLOGY, 1998, 5 (04) :310-316
[8]  
Edens WA, 1999, APPL ENVIRON MICROB, V65, P3071
[9]   LACCASE-MEDIATED FORMATION OF THE PHENOXAZINONE DERIVATIVE, CINNABARINIC ACID [J].
EGGERT, C ;
TEMP, U ;
DEAN, JFD ;
ERIKSSON, KEL .
FEBS LETTERS, 1995, 376 (03) :202-206
[10]   Crystal structure of a bacterial endospore coat component - A laccase with enhanced thermostability properties [J].
Enguita, FJ ;
Martins, LO ;
Henriques, AO ;
Carrondo, MA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (21) :19416-19425