Solution Structure of LCI, a Novel Antimicrobial Peptide from Bacillus subtilis

被引:52
作者
Gong, Weibin [1 ]
Wang, Jinfeng [3 ]
Chen, Zhangliang [1 ]
Xia, Bin [1 ,2 ]
Lu, Guangying [1 ]
机构
[1] Peking Univ, Natl Lab Prot Engn & Plant Genet Engn, Coll Life Sci, Beijing 100871, Peoples R China
[2] Peking Univ, Coll Chem & Mol Engn, Beijing 100871, Peoples R China
[3] Chinese Acad Sci, Inst Biophys, Beijing 100101, Peoples R China
基金
中国国家自然科学基金;
关键词
SURFACE-PLASMON RESONANCE; PROTEIN-STRUCTURE; NMR-SPECTROSCOPY; BACKBONE; ASSIGNMENT; BACTERIA; DATABASE;
D O I
10.1021/bi200123w
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
LCI, a 47-residue cationic antimicrobial peptide (AMP) found in Bacillus subtilis, is one of the main effective components that have strong antimicrobial activity against Xanthomonas campestris pv Oryzea and Pseudomonas solanacearum PE1, etc. To provide insight into the activity of the peptide, we used nuclear magnetic resonance spectroscopy to determine the structure of recombinant LCI. The solution structure of LCI has a novel topology, containing a four-strand antiparallel beta-sheet as the dominant secondary structure; It is the first structure of the LCI protein family. Different from any known beta-structure AMPs, LCI contains no disulfide bridge or circular structure, suggesting that LCI is also a novel beta-structure AMP.
引用
收藏
页码:3621 / 3627
页数:7
相关论文
共 43 条
  • [1] COHERENCE TRANSFER BY ISOTROPIC MIXING - APPLICATION TO PROTON CORRELATION SPECTROSCOPY
    BRAUNSCHWEILER, L
    ERNST, RR
    [J]. JOURNAL OF MAGNETIC RESONANCE, 1983, 53 (03) : 521 - 528
  • [2] Antimicrobial peptides: Pore formers or metabolic inhibitors in bacteria?
    Brogden, KA
    [J]. NATURE REVIEWS MICROBIOLOGY, 2005, 3 (03) : 238 - 250
  • [3] Crystallography & NMR system:: A new software suite for macromolecular structure determination
    Brunger, AT
    Adams, PD
    Clore, GM
    DeLano, WL
    Gros, P
    Grosse-Kunstleve, RW
    Jiang, JS
    Kuszewski, J
    Nilges, M
    Pannu, NS
    Read, RJ
    Rice, LM
    Simonson, T
    Warren, GL
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 : 905 - 921
  • [4] Case DA., 2002, AMBER7
  • [5] Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42
    Chen, Xiao Hua
    Koumoutsi, Alexandra
    Scholz, Romy
    Eisenreich, Andreas
    Schneider, Kathrin
    Heinemeyer, Isabelle
    Morgenstern, Burkhard
    Voss, Bjoern
    Hess, Wolfgang R.
    Reva, Oleg
    Junge, Helmut
    Voigt, Birgit
    Jungblut, Peter R.
    Vater, Joachim
    Suessmuth, Roderich
    Liesegang, Heiko
    Strittmatter, Axel
    Gottschalk, Gerhard
    Borriss, Rainer
    [J]. NATURE BIOTECHNOLOGY, 2007, 25 (09) : 1007 - 1014
  • [6] Antineoplastic properties of bacteriocins - Revisiting potential active agents
    Cornutt, Gilbert
    Fortin, Claude
    Soulieres, Denis
    [J]. AMERICAN JOURNAL OF CLINICAL ONCOLOGY-CANCER CLINICAL TRIALS, 2008, 31 (04): : 399 - 404
  • [7] SANE (Structure assisted NOE evaluation): An automated model-based approach for NOE assignment
    Duggan, BM
    Legge, GB
    Dyson, HJ
    Wright, PE
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2001, 19 (04) : 321 - 329
  • [8] Locating proteins in the cell using TargetP, SignalP and related tools
    Emanuelsson, Olof
    Brunak, Soren
    von Heijne, Gunnar
    Nielsen, Henrik
    [J]. NATURE PROTOCOLS, 2007, 2 (04) : 953 - 971
  • [9] Epand RM, 2010, ADV M C M, P116, DOI 10.1079/9781845936570.0116
  • [10] Fant F, 1999, PROTEINS, V37, P388, DOI 10.1002/(SICI)1097-0134(19991115)37:3<388::AID-PROT7>3.0.CO