Genetic Differentiation, Diversity, and Drug Susceptibility of Candida krusei

被引:21
作者
Gong, Jie [1 ]
Xiao, Meng [2 ,3 ]
Wang, He [2 ,3 ]
Kudinha, Timothy [4 ,5 ]
Wang, Yu [6 ]
Zhao, Fei [1 ]
Wu, Weiwei [7 ]
He, Lihua [1 ]
Xu, Ying-Chun [2 ,3 ]
Zhang, Jianzhong [1 ]
机构
[1] Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, Collaborat Innovat Ctr Diag & Treatment Infect Di, State Key Lab Infect Dis Prevent & Control, Beijing, Peoples R China
[2] Chinese Acad Med Sci, Peking Union Med Coll Hosp, Dept Clin Lab, Beijing, Peoples R China
[3] Beijing Key Lab Mech Res & Precis Diag Invas Fung, Beijing, Peoples R China
[4] Charles Sturt Univ, Sch Biomed Sci, Orange, NSW, Australia
[5] Cent West Pathol Lab, Orange, NSW, Australia
[6] Zhejiang Normal Univ, Key Lab Wildlife Biotechnol Conservat & Utilizat, Jinhua, Peoples R China
[7] Hainan Prov Ctr Skin Dis & STI Control, Dept Dermatol, Haikou, Hainan, Peoples R China
关键词
Candida krusei; invasive candidiasis; genetic differentiation; genetic diversity; microsatellites; drug susceptibility; POPULATION-STRUCTURE; RESISTANCE; VORICONAZOLE; SOFTWARE; MICROSATELLITE; CASPOFUNGIN; FLUCONAZOLE; EMERGENCE; PATHOGEN; SEQUENCE;
D O I
10.3389/fmicb.2018.02717
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Candida krusei is a notable pathogenic fungus that causes invasive candidiasis, mainly due to its natural resistance to fluconazole. However, to date, there is limited research on the genetic population features of C. krusei. We developed a set of microsatellite markers for this organism, with a cumulative discriminatory power of 1,000. Using these microsatellite loci, 48 independent C. krusei strains of clearly known the sources, were analyzed. Furthermore, susceptibility to 9 antifungal agents was determined for each strain, by the Clinical and Laboratory Standards Institute broth microdilution method. Population structure analyses revealed that C. krusei could be separated into two clusters. The cluster with the higher genetic diversity had wider MIC ranges for six antifungal agents. Furthermore, the highest MIC values of the six antifungal agents belonged to the cluster with higher genetic diversity. The higher genetic diversity cluster might have a better adaptive capacity when C. krusei is under selection pressure from antifungal agents, and thus is more likely to develop drug resistance.
引用
收藏
页数:10
相关论文
共 35 条
[11]  
Freeland J.R., 2011, Molecular ecology, V2nd
[12]   Genetic basis for differential activities of fluconazole and voriconazole against Candida krusei [J].
Fukuoka, T ;
Johnston, DA ;
Winslow, CA ;
de Groot, MJ ;
Burt, C ;
Hitchcock, CA ;
Filler, SG .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2003, 47 (04) :1213-1219
[13]   Population differentiation and genetic diversity of Trichophyton rubrum as revealed by highly discriminatory microsatellites [J].
Gong, Jie ;
Wu, Weiwei ;
Ran, MengLong ;
Wang, Xiaowen ;
Liu, Wei ;
Wan, Zhe ;
Yao, Limin ;
Li, Ruoyu .
FUNGAL GENETICS AND BIOLOGY, 2016, 95 :24-29
[14]   FSTAT (Version 1.2): A computer program to calculate F-statistics [J].
Goudet, J .
JOURNAL OF HEREDITY, 1995, 86 (06) :485-486
[15]   Emergence of a Candida krusei isolate with reduced susceptibility to caspofungin during therapy [J].
Hakki, Morgan ;
Staab, Janet F. ;
Marr, Meren A. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2006, 50 (07) :2522-2524
[16]   NUMERICAL INDEX OF THE DISCRIMINATORY ABILITY OF TYPING SYSTEMS - AN APPLICATION OF SIMPSONS INDEX OF DIVERSITY [J].
HUNTER, PR ;
GASTON, MA .
JOURNAL OF CLINICAL MICROBIOLOGY, 1988, 26 (11) :2465-2466
[17]   Strain typing and determination of population structure of Candida krusei by multilocus sequence typing [J].
Jacobsen, Mette D. ;
Gow, Neil A. R. ;
Maiden, Martin C. J. ;
Shaw, Duncan J. ;
Odds, Frank C. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (02) :317-323
[18]   Echinocandin Failure Case Due to a Previously Unreported FKS1 Mutation in Candida krusei [J].
Jensen, Rasmus Hare ;
Justesen, Ulrik Stenz ;
Rewes, Annika ;
Perlin, David S. ;
Arendrup, Maiken Cavling .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2014, 58 (06) :3550-3552
[19]   SciRoKo:: a new tool for whole genome microsatellite search and investigation [J].
Kofler, Robert ;
Schloetterer, Christian ;
Lelley, Tamas .
BIOINFORMATICS, 2007, 23 (13) :1683-1685
[20]   Invasive Candidiasis [J].
Kullberg, Bart Jan ;
Arendrup, Maiken C. .
NEW ENGLAND JOURNAL OF MEDICINE, 2015, 373 (15) :1445-1456