Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding

被引:12
作者
Wongsantichon, Jantana [1 ,2 ]
Robinson, Robert C. [2 ]
Ketterman, Albert J. [1 ]
机构
[1] Mahidol Univ, Inst Mol Biosci, Salaya 73170, Nakhon Pathom, Thailand
[2] Inst Mol & Cell Biol, Proteos 138673, Singapore
关键词
Drosophila melanogaster; Anopheles dirus; Crystal structure; Glutathione transferase; Induced-fit; S-TRANSFERASE; 3-DIMENSIONAL STRUCTURE; CRYSTAL-STRUCTURE; ACTIVE-SITE; RESISTANCE; COMPLEX; VECTOR; P1-1; DDT; EXPRESSION;
D O I
10.1016/j.abb.2012.03.023
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We report four new crystal structures for Delta class glutathione transferases from insects. We compare these new structures as well as several previously reported structures to determine that structural transitions can be observed with ligand binding. These transitions occurred in the regions around the active site entrance, including alpha helix 2, C-terminus of alpha helix 4 including the loop to helix 5 and the C-terminus of helix 8. These structural movements have been reported or postulated to occur for several other glutathione transferase classes; however, this is the first report showing structural evidence of all these movements occurring, in this case in Delta class glutathione transferases. These fluctuations also can be observed occurring within a single structure as there is ligand bound in only one subunit and each subunit is undergoing different conformational transitions. The structural comparisons show reorganizations occur both pre- and post-GSH ligand binding communicated through the subunit interface of the quaternary assembly. Movements of these positions would allow 'breathing' of the active site for substrate entrance, topological rearrangement for varying substrate specificity and final product release. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:77 / 83
页数:7
相关论文
共 43 条
  • [1] Crystallographic and Functional Characterization of the Fluorodifen-inducible Glutathione Transferase from Glycine max Reveals an Active Site Topography Suited for Diphenylether Herbicides and a Novel L-site
    Axarli, Irene
    Dhavala, Prathusha
    Papageorgiou, Anastassios C.
    Labrou, Nikolaos E.
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2009, 385 (03) : 984 - 1002
  • [2] Crystal structure of Glycine max glutathione transferase in complex with glutathione: investigation of the mechanism operating by the Tau class glutathione transferases
    Axarli, Irene
    Dhavala, Prathusha
    Papageorgiou, Anastassios C.
    Labrou, Nikolaos E.
    [J]. BIOCHEMICAL JOURNAL, 2009, 422 : 247 - 256
  • [3] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [4] EVIDENCE FOR AN ESSENTIAL SERINE RESIDUE IN THE ACTIVE-SITE OF THE THETA-CLASS GLUTATHIONE TRANSFERASES
    BOARD, PG
    COGGAN, M
    WILCE, MCJ
    PARKER, MW
    [J]. BIOCHEMICAL JOURNAL, 1995, 311 : 247 - 250
  • [5] Catalytic mechanism and role of hydroxyl residues in the active site of theta class glutathione S-transferases - Investigation of Ser-9 and Tyr-113 in a glutathione S-transferase from the Australian sheep blowfly, Lucilia cuprina
    Caccuri, AM
    Antonini, G
    Nicotra, M
    Battistoni, A
    LoBello, M
    Board, PG
    Parker, MW
    Ricci, G
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (47) : 29681 - 29686
  • [6] Cho HY, 2007, J BIOCHEM MOL BIOL, V40, P511
  • [7] MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
    Davis, Ian W.
    Leaver-Fay, Andrew
    Chen, Vincent B.
    Block, Jeremy N.
    Kapral, Gary J.
    Wang, Xueyi
    Murray, Laura W.
    Arendall, W. Bryan, III
    Snoeyink, Jack
    Richardson, Jane S.
    Richardson, David C.
    [J]. NUCLEIC ACIDS RESEARCH, 2007, 35 : W375 - W383
  • [8] DeLano W.L., 2002, The PyMOL molecular graphics system
  • [9] The Anopheles gambiae glutathione transferase supergene family:: annotation, phylogeny and expression profiles -: art. no. 35
    Ding, YC
    Ortelli, F
    Rossiter, LC
    Hemingway, J
    Ranson, H
    [J]. BMC GENOMICS, 2003, 4 (1)
  • [10] Structures of a putative ζ-class glutathione S-transferase from the pathogenic fungus Coccidioides immitis
    Edwards, Thomas E.
    Bryan, Cassie M.
    Leibly, David J.
    Dieterich, Shellie H.
    Abendroth, Jan
    Sankaran, Banumathi
    Sivam, Dhileep
    Staker, Bart L.
    Van Voorhis, Wesley C.
    Myler, Peter J.
    Stewart, Lance J.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2011, 67 : 1038 - 1043