Metabolic Variations between Low-Grade and High-Grade Gliomas-Profiling by 1H NMR Spectroscopy

被引:22
作者
Jothi, Jayalakshmi [1 ]
Janardhanam, Vanisree Arambakkam [1 ]
Krishnaswamy, Rama [2 ,3 ]
机构
[1] Univ Madras, Dept Biochem, Chennai 600025, Tamil Nadu, India
[2] Madras Med Coll & Govt Gen Hosp, Dept Neuropathol, Chennai 600003, Tamil Nadu, India
[3] Govt Gen Hosp, Chennai 600003, Tamil Nadu, India
关键词
glioma; H-1; NMR; metabolomics; chemometrics; multivariate analysis; NMR-BASED METABOLOMICS; MAGNETIC-RESONANCE; MASS-SPECTROMETRY; MALIGNANT GLIOMA; CANCER; LACTATE; TISSUE; QUANTIFICATION; SIGNATURE; BIOMARKER;
D O I
10.1021/acs.jproteome.0c00243
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Altered cellular metabolism is one of the crucial hallmarks of glioma that deserves exploration, as the metabolites act as direct indicators of protein function and genetic variations. The current study focused on the metabolomic profiling of patients from whom glioma specimens were obtained for the identification of specific metabolites that could distinguish the low grade and high grade. In the current study, H-1 NMR spectroscopy was carried out and the data were analyzed by partial least-squares discriminant analysis (PLS-DA) and orthogonal projection to latent structure with discriminant analysis (OPLS-DA). Pathway analysis was done to associate characteristic metabolites with the grades of sample using MetaboAnalyst 4.0 software based on the KEGG metabolic pathways database. Distinctive metabolic profiles among low- and high-grade gliomas with top 15 characteristic metabolites that could discriminate these grades were identified on the basis of their VIP scores from the OPLS-DA model. The major altered metabolic pathways include choline, taurine and hypotaurine, glutamate/glutamine, glutathione, and phenyl alanine/tyrosine, which were found to be consistent with the particular grade of a sample. Our study clearly demonstrated a characteristic metabolic profile of individual grades of glioma, suggesting that an altered metabolism is consistent with the specific grades of glioma appreciation and could lead to the development novel treatment strategies.
引用
收藏
页码:2483 / 2490
页数:8
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