Lncing Epigenetic Control of Transcription to Cardiovascular Development and Disease

被引:55
作者
Rizki, Gizem [1 ]
Boyer, Laurie A. [1 ]
机构
[1] MIT, Dept Biol, Cambridge, MA 02139 USA
关键词
cardiovascular disease; epigenomics; homeostasis; long noncoding RNA; LONG NONCODING RNA; CORONARY-ARTERY-DISEASE; GENE-EXPRESSION; CARDIAC-HYPERTROPHY; HEART; DIFFERENTIATION; MECHANISMS; EVOLUTION; GENOME; MOUSE;
D O I
10.1161/CIRCRESAHA.117.304156
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Transcriptional and epigenetic regulation is critical for proper heart development, cardiac homeostasis, and pathogenesis. Long noncoding RNAs have emerged as key components of the transcriptional regulatory pathways that govern cardiac development as well as stress response, signaling, and remodeling in cardiac pathologies. Within the past few years, studies have identified many long noncoding RNAs in the context of cardiovascular biology and have begun to reveal the key functions of these transcripts. In this review, we discuss the growing roles of long noncoding RNAs in different aspects of cardiovascular development as well as pathological responses during injury or disease. In addition, we discuss diverse mechanisms by which long noncoding RNAs orchestrate cardiac transcriptional programs. Finally, we explore the exciting potential of this novel class of transcripts as biomarkers and novel therapeutic targets for cardiovascular diseases.
引用
收藏
页码:192 / 206
页数:15
相关论文
共 147 条
[11]   Noncoding RNA and Polycomb recruitment [J].
Brockdorff, Neil .
RNA, 2013, 19 (04) :429-442
[12]   The developmental genetics of congenital heart disease [J].
Bruneau, Benoit G. .
NATURE, 2008, 451 (7181) :943-948
[13]   Signaling and Transcriptional Networks in Heart Development and Regeneration [J].
Bruneau, Benoit G. .
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY, 2013, 5 (03)
[14]   Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers [J].
Brunner, Alayne L. ;
Beck, Andrew H. ;
Edris, Badreddin ;
Sweeney, Robert T. ;
Zhu, Shirley X. ;
Li, Rui ;
Montgomery, Kelli ;
Varma, Sushama ;
Gilks, Thea ;
Guo, Xiangqian ;
Foley, Joseph W. ;
Witten, Daniela M. ;
Giacomini, Craig P. ;
Flynn, Ryan A. ;
Pollack, Jonathan R. ;
Tibshirani, Robert ;
Chang, Howard Y. ;
van de Rijn, Matt ;
West, Robert B. .
GENOME BIOLOGY, 2012, 13 (08) :R75
[15]   NONCODE v3.0: integrative annotation of long noncoding RNAs [J].
Bu, Dechao ;
Yu, Kuntao ;
Sun, Silong ;
Xie, Chaoyong ;
Skogerbo, Geir ;
Miao, Ruoyu ;
Xiao, Hui ;
Liao, Qi ;
Luo, Haitao ;
Zhao, Guoguang ;
Zhao, Haitao ;
Liu, Zhiyong ;
Liu, Changning ;
Chen, Runsheng ;
Zhao, Yi .
NUCLEIC ACIDS RESEARCH, 2012, 40 (D1) :D210-D215
[16]   Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses [J].
Cabili, Moran N. ;
Trapnell, Cole ;
Goff, Loyal ;
Koziol, Magdalena ;
Tazon-Vega, Barbara ;
Regev, Aviv ;
Rinn, John L. .
GENES & DEVELOPMENT, 2011, 25 (18) :1915-1927
[17]   The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation [J].
Caretti, Giuseppina ;
Schiltz, R. Louis ;
Dilworth, F. Jeffrey ;
Di Padova, Monica ;
Zhao, Po ;
Ogryzko, Vasily ;
Fuller-Pace, Frances V. ;
Hoffman, Eric P. ;
Tapscott, Stephen J. ;
Sartorelli, Vittorio .
DEVELOPMENTAL CELL, 2006, 11 (04) :547-560
[18]   The transcriptional landscape of the mammalian genome [J].
Carninci, P ;
Kasukawa, T ;
Katayama, S ;
Gough, J ;
Frith, MC ;
Maeda, N ;
Oyama, R ;
Ravasi, T ;
Lenhard, B ;
Wells, C ;
Kodzius, R ;
Shimokawa, K ;
Bajic, VB ;
Brenner, SE ;
Batalov, S ;
Forrest, ARR ;
Zavolan, M ;
Davis, MJ ;
Wilming, LG ;
Aidinis, V ;
Allen, JE ;
Ambesi-Impiombato, X ;
Apweiler, R ;
Aturaliya, RN ;
Bailey, TL ;
Bansal, M ;
Baxter, L ;
Beisel, KW ;
Bersano, T ;
Bono, H ;
Chalk, AM ;
Chiu, KP ;
Choudhary, V ;
Christoffels, A ;
Clutterbuck, DR ;
Crowe, ML ;
Dalla, E ;
Dalrymple, BP ;
de Bono, B ;
Della Gatta, G ;
di Bernardo, D ;
Down, T ;
Engstrom, P ;
Fagiolini, M ;
Faulkner, G ;
Fletcher, CF ;
Fukushima, T ;
Furuno, M ;
Futaki, S ;
Gariboldi, M .
SCIENCE, 2005, 309 (5740) :1559-1563
[19]   The Long Non-Coding HOTAIR Is Modulated by Cyclic Stretch and WNT/β-CATENIN in Human Aortic Valve Cells and Is a Novel Repressor of Calcification Genes [J].
Carrion, Katrina ;
Dyo, Jeffrey ;
Patel, Vishal ;
Sasik, Roman ;
Mohamed, Salah A. ;
Hardiman, Gary ;
Nigam, Vishal .
PLOS ONE, 2014, 9 (05)
[20]   A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA [J].
Cesana, Marcella ;
Cacchiarelli, Davide ;
Legnini, Ivano ;
Santini, Tiziana ;
Sthandier, Olga ;
Chinappi, Mauro ;
Tramontano, Anna ;
Bozzoni, Irene .
CELL, 2011, 147 (02) :358-369