Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers

被引:5
|
作者
Choi, Hee-kyu [1 ]
Jang, Ji Eun [1 ]
Byeon, Seo Yeon [1 ]
Kim, Yu Rim [1 ]
Maschette, Dale [2 ,3 ]
Chung, Sangdeok [4 ]
Choi, Seok-Gwan [4 ]
Kim, Hyun-Woo [5 ]
Lee, Hyuk Je [1 ]
机构
[1] Sangji Univ, Dept Biol Sci, Mol Ecol & Evolut Lab, Wonju, South Korea
[2] Univ Tasmania, Fisheries & Aquaculture Ctr, Inst Marine & Antarctic Studies, Hobart, Tas, Australia
[3] Australian Antarctic Div, Dept Agr Water & Environm, Kingston, Tas, Australia
[4] Natl Inst Fisheries Sci, Distant Water Fisheries Resources Div, Busan, South Korea
[5] Pukyong Natl Univ, Dept Marine Biol, Busan, South Korea
关键词
Antarctic toothfish; CCAMLR; fishery management; genetic diversity; population connectivity; contemporary gene flow; genetic stock; phylogeographic break; RE-IMPLEMENTATION; NUCLEAR-DNA; EVOLUTION; SOFTWARE; OCEAN; SIZE; PHYLOGENIES; ATLANTIC; GROWTH;
D O I
10.3389/fmars.2021.666417
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The Antarctic toothfish, Dissostichus mawsoni, serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for improving fishery management of this species, its number of genetic populations and genetic diversity levels remain ambiguous. In the present study, we assessed the population genetic and phylogeographic structure of the Antarctic toothfish across 20 geographic localities spanning from Subareas 88 (88.1, 88.2, and 88.3) to Subareas 58 (58.4 and 58.5) by using mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and 16S rRNA (16S) sequences and seven nuclear microsatellite loci. MtDNA revealed a low level of polymorphism (h = 0.571, pi = 0.0006) with 40 haplotypes in 392 individuals, connected only by 1-5 mutational steps, which is indicative of shallow evolutionary history. Microsatellites showed a range of allelic richness (AR) from 6.328 (88.3 RB3) to 7.274 (88.3 RB6) within populations. Overall genetic diversity was generally higher in Subareas 58 than in Subareas 88, suggesting that effective population size (N-E) is larger in Subareas 58. The results of population analyses using microsatellites suggest that the sampled populations are likely to comprise a well-admixed single gene pool (i.e., one genetic stock), perhaps due to high contemporary gene flow occurring during the prolonged larval phase of this fish. However, given weak, but significant microsatellite differentiation found in six population-pairs, the possibility of existence of multiple genetic populations could not be completely excluded. The mtDNA AMOVA suggests a genetic break between the Subareas 88 and 58 groups (F-CT = 0.011, P = 0.004). Moreover, mtDNA genetic distances (F-ST) between populations were proportionally greater as geographic distances increase. The patterns of isolation by distance (IBD) shown only in mtDNA, but not in microsatellites might suggest that population differentiation or divergence processes underwent faster in mtDNA than microsatellites, due to its N-E being only one-quarter of nuclear DNA. Temporal stability in the genetic structure of D. mawsoni is also indicated by the results of no genetic differentiation between juveniles and adults. The findings of this study will help to design effective stock management strategies for this valuable fishery resource. We suggest that a long-term genetic monitoring is needed to understand the population structure and dynamics of toothfish in response to ongoing climate changes.
引用
收藏
页数:17
相关论文
共 50 条
  • [21] Genetic diversity and population structure of Lychnis wilfordii (Caryophyllaceae) with newly developed 17 microsatellite markers
    Kim, Bora
    Nakamura, Koh
    Tamura, Saya
    Lee, Byoung Yoon
    Kwak, Myounghai
    GENES & GENOMICS, 2019, 41 (04) : 381 - 387
  • [22] Genetic diversity and population structure of Mongolian regional horses with 14 microsatellite markers
    Yun, Jihye
    Oyungerel, Baatartsogt
    Kong, Hong Sik
    ANIMAL BIOSCIENCE, 2022, 35 (08) : 1121 - 1128
  • [23] Genetic diversity and population structure of Zymoseptoria tritici in Ethiopia as revealed by microsatellite markers
    Mekonnen, Tilahun
    Haileselassie, Teklehaimanot
    Goodwin, Stephen B.
    Tesfayea, Kassahun
    FUNGAL GENETICS AND BIOLOGY, 2020, 141
  • [24] Population Genetic Structure and Demographic History of Atrina pectinata Based on Mitochondrial DNA and Microsatellite Markers
    Xue, Dong-Xiu
    Wang, Hai-Yan
    Zhang, Tao
    Liu, Jin-Xian
    PLOS ONE, 2014, 9 (05):
  • [25] Genetic Population Structure of the Hard Clam Meretrix meretrix Along the Chinese Coastlines Revealed by Microsatellite DNA Markers
    Ye, Yingying
    Yan, Chengrui
    Senanan, Wansuk
    Guo, Baoying
    Xu, Kaida
    Lu, Zhenming
    FRONTIERS IN MARINE SCIENCE, 2020, 7
  • [26] Genetic diversity and population structure of Taxus cuspidata in the Changbai Mountains assessed by chloroplast DNA sequences and microsatellite markers
    Cheng, Bei-bei
    Zheng, Yong-qi
    Sun, Qi-wu
    BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2015, 63 : 157 - 164
  • [27] Antarctic Toothfish Dissostichus mawsoni in the South Orkney Islands: Using Otolith Chemistry to Test Current Hypotheses About Nursery Areas and Demographic Units
    Cariman, Paulina
    Niklitschek, Edwin J.
    Garces, Cristobal
    Leisen, Mathieu
    Barra, Fernando
    Romero, Rurik
    BIOLOGY-BASEL, 2025, 14 (01):
  • [28] Genetic Diversity and Population Structure in Chinese Indigenous Poplar (Populus simonii) Populations Using Microsatellite Markers
    Wei, Zunzheng
    Du, Qingzhang
    Zhang, Jinfeng
    Li, Bailian
    Zhang, Deqiang
    PLANT MOLECULAR BIOLOGY REPORTER, 2013, 31 (03) : 620 - 632
  • [29] Genetic diversity and population structure of Garcinia paucinervis, an endangered species using microsatellite markers
    Jun-Jie Zhang
    Xiao Wei
    Sheng-Feng Chai
    Zheng-Feng Wang
    Theophine Akunne
    Shao-Hua Wu
    Jun-Hong Yi
    Ji-Qing Wei
    Zong-You Chen
    Conservation Genetics, 2019, 20 : 837 - 849
  • [30] Evaluation of the genetic diversity and population structure of Chinese indigenous horse breeds using 27 microsatellite markers
    Ling, Y. H.
    Ma, Y. H.
    Guan, W. J.
    Cheng, Y. J.
    Wang, Y. P.
    Han, J. L.
    Mang, L.
    Zhao, Q. J.
    He, X. H.
    Pu, Y. B.
    Fu, B. L.
    ANIMAL GENETICS, 2011, 42 (01) : 56 - 65