The complete chloroplast genome of Rhododendron kawakamii (Ericaceae)

被引:6
|
作者
Wang, Zheng-Feng [1 ,2 ,3 ]
Chang, Li-Wan [4 ]
Cao, Hong-Lin [1 ,2 ,3 ]
机构
[1] Chinese Acad Sci, South China Bot Garden, Key Lab Vegetat Restorat & Management Degraded Ec, Guangzhou, Peoples R China
[2] Chinese Acad Sci, Core Bot Gardens, Ctr Plant Ecol, Guangzhou, Peoples R China
[3] Southern Marine Sci & Engn Guangdong Lab Guangzho, Guangzhou, Peoples R China
[4] Taiwan Forestry Res Inst, Forest Protect Div, Taipei, Taiwan
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 09期
关键词
Rhododendron kawakamii; chloroplast; genome assembly; next generation sequencing; PROTEASE;
D O I
10.1080/23802359.2021.1959439
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Rhododendron kawakamii is endemic in Taiwan island and is a unique and epiphytic species. Here, we report its complete chloroplast genome. The length of the R. kawakamii chloroplast genome is 230,777 bp, with a large single-copy region of 146,155 bp, a small single-copy region of 72,082 bp, and a pair of inverted repeat regions (IRA) of 6,270 bp each. The genome contains 77 protein-coding genes, 29 transfer RNA genes, and four ribosomal RNA genes. In addition, the genome contains 81 simple sequence repeats. Phylogenetic analysis revealed that R. kawakamii is genetically related to R. datiandingense.
引用
收藏
页码:2538 / 2540
页数:3
相关论文
共 50 条
  • [1] The complete chloroplast genome of Rhododendron delavayi (Ericaceae)
    Liu, Jie
    Chen, Ting
    Zhang, Yubin
    Li, Yuke
    Gong, Jiyi
    Yi, Yin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 37 - 38
  • [2] The complete chloroplast genome of rhododendron williamsianum (ericaceae)
    Zhou, Daoyuan
    Wang, Juan
    Zhou, Fengjuan
    Li, Zhongxiang
    Qi, Yangyang
    Hu, Tingting
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (08): : 1058 - 1062
  • [3] The complete chloroplast genome of Rhododendron huadingense (Ericaceae)
    An, Ran
    Niu, Mingyue
    Lou, Xiongzhen
    Huang, Huahong
    Lin, Erpei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (11): : 1910 - 1912
  • [4] The complete chloroplast genome of Rhododendron datiandingense (Ericaceae)
    Wang, Zheng-Feng
    Feng, Hui-Fang
    Li, You-Yu
    Wang, Hui-Feng
    Cao, Hong-Lin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (06): : 1749 - 1751
  • [5] The complete chloroplast genome sequence of Rhododendron caucasicum (Ericaceae)
    Kwak, Myounghai
    Bussmann, Rainer W.
    KOREAN JOURNAL OF PLANT TAXONOMY, 2023, 53 (03): : 230 - 236
  • [6] The complete chloroplast genome of Rhododendron calophytum Franch (Ericaceae)
    Ma, Wenbao
    Yu, Tao
    Wang, Wanjiang
    Wang, Fei
    Ji, Huijuan
    Mu, Changlong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (09): : 1758 - 1759
  • [7] The complete chloroplast genome sequence of Rhododendron farrerae Tate ex Sweet (Ericaceae)
    Shen, Jianshuang
    Huang, Lu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (01): : 1 - 4
  • [8] The complete chloroplast genome of Rhododendron molle and its phylogenetic position within Ericaceae
    Liu, Yan
    Li, Qiaoyun
    Wang, Ling
    Wu, Linshi
    Huang, Yaqi
    Zhang, Juan
    Song, Yin
    Liao, Juyang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (09): : 2587 - 2588
  • [9] The complete chloroplast genome of Rhododendron platypodum (Ericaceae): an endemic and endangered species from China
    Ma, Li-Hui
    Zhu, Hao-Xiang
    Wang, Chao-Ying
    Li, Ming-Yang
    Wang, Hai-Yang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 196 - 197
  • [10] The complete chloroplast genome sequence of Rhododendron fortunei: structural comparative and phylogenetic analysis in the Ericaceae family
    Xiao, Yunli
    Zhang, Wanjing
    Sun, Yirong
    Li, Zhiliang
    Yu, Jiaojun
    Zhang, Chunyu
    Wang, Shuzhen
    BOTANICA SERBICA, 2023, 47 (02) : 279 - 290