Identification of Amino Acid Properties using Electrical Codon Network

被引:0
|
作者
Roy, Tanusree [1 ]
Roy, Shreya [1 ]
Kundu, Suraj [1 ]
Paul, Suvajit [1 ]
机构
[1] Univ Engn & Management, Dept Elect & Elect Engn, Kolkata, India
来源
2017 4TH INTERNATIONAL CONFERENCE ON OPTO-ELECTRONICS AND APPLIED OPTICS (OPTRONIX) | 2017年
关键词
codon; amino acid; transfer function model; electrical network; simulation;
D O I
暂无
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
Extensive research activities in modeling electrical network of biological system have captured the interest of several researchers in recent years. Codons are the basic elements in DNA sequence which specify unique amino acids and form protein. Total 64 codons are modeled using passive ladder circuit consisting L and C to identify the properties of 20 amino acids. Corresponding circuits are converted into transfer function models to find out the correlations between simulated electrical responses and biological properties. The model responses are examined based on the amino acid properties such as hydrophobic or hydrophilic, aliphatic or aromatic etc. to demonstrate the effectiveness of the proposed scheme.
引用
收藏
页数:5
相关论文
共 50 条
  • [1] Amino Acid Classification based on Electrical Response of its Codon Composition
    Dutta, Monalisa
    Pandit, Soumya
    Barman, Soma
    2015 IEEE INTERNATIONAL CONFERENCE ON RESEARCH IN COMPUTATIONAL INTELLIGENCE AND COMMUNICATION NETWORKS (ICRCICN), 2015, : 279 - 284
  • [2] Electrical properties of amino acid substituted novel cinnamic acid compounds
    Caliskan, Eray
    Koran, Kenan
    Gorgulu, Ahmet Orhan
    Cetin, Ahmet
    JOURNAL OF MOLECULAR STRUCTURE, 2020, 1222
  • [3] Identifying Amino Acid Overproducers Using Rare-Codon-Rich Markers
    Huo, Yi-Xin
    Zheng, Bo
    Wang, Ning
    Yang, Yunpeng
    Liang, Xinxin
    Ma, Xiaoyan
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2019, (148):
  • [4] Codon usage and amino acid usage influence genes expression level
    Paul, Prosenjit
    Malakar, Arup Kumar
    Chakraborty, Supriyo
    GENETICA, 2018, 146 (01) : 53 - 63
  • [5] Codon usage and amino acid usage influence genes expression level
    Prosenjit Paul
    Arup Kumar Malakar
    Supriyo Chakraborty
    Genetica, 2018, 146 : 53 - 63
  • [6] Adaptation of codon and amino acid use for translational functions in highly expressed cricket genes
    Carrie A. Whittle
    Arpita Kulkarni
    Nina Chung
    Cassandra G. Extavour
    BMC Genomics, 22
  • [7] Computational Analysis of a Prebiotic Amino Acid Synthesis with Reference to Extant Codon-Amino Acid Relationships
    Yaman, Tolga
    Harvey, Jeremy N.
    LIFE-BASEL, 2021, 11 (12):
  • [8] Adaptation of codon and amino acid use for translational functions in highly expressed cricket genes
    Whittle, Carrie A.
    Kulkarni, Arpita
    Chung, Nina
    Extavour, Cassandra G.
    BMC GENOMICS, 2021, 22 (01)
  • [9] Codes in the codons:: Construction of a codon/amino acid periodic table and a study of the nature of specific nucleic acid -: Protein interactions
    Benyó, B
    Biro, JC
    Benyó, Z
    PROCEEDINGS OF THE 26TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY, VOLS 1-7, 2004, 26 : 2860 - 2863
  • [10] The Influence of the Selection at the Amino Acid Level on Synonymous Codon Usage from the Viewpoint of Alternative Genetic Codes
    Pawlak, Konrad
    Blazej, Pawel
    Mackiewicz, Dorota
    Mackiewicz, Pawel
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (02)