Improving the fermentation medium for Echinocandin B production part II:: Particle swarm optimization

被引:47
作者
Cockshott, AR [1 ]
Hartman, BE [1 ]
机构
[1] Eli Lilly & Co, Lilly Corp Ctr, Lilly Res Labs, Indianapolis, IN 46285 USA
关键词
fermentation medium optimization; evolutionary algorithms; particle swarm optimization; statistical design; shake-flask; global optimization;
D O I
10.1016/S0032-9592(00)00261-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Particle swarm optimization was used to improve the medium for the production of Echinocandin B (ECB) by Aspergillus nidulans. Fifteen medium ingredients were optimized using a total of 135 shake-flask fermentations (nine iterations). The best medium improved titre by 41%. A traditional statistical design approach using similar numbers of shake-flask fermentations improved the titre by 46%. by optimizing five ingredients screened from the original 15. The PSO approach yielded a different optimum medium than the statistical design methods used. (C) 2001 Elsevier Science Ltd. All rights reserved.
引用
收藏
页码:661 / 669
页数:9
相关论文
共 9 条
  • [1] [Anonymous], 1996, COMPUTATIONAL INTELL
  • [2] BACK T, 1993, EVOLUTIONARY COMPUTA, P1
  • [3] A comparison of a genetic algorithm with an experimental design technique in the optimization of a production process
    Backhouse, PG
    Fotheringham, AF
    Allan, G
    [J]. JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY, 1997, 48 (03) : 247 - 254
  • [4] Eberhard R.C., 1995, P 6 INT S MICR HUM S, P39, DOI DOI 10.1109/MHS.1995.494215
  • [5] Fogel D. B., 1997, Proceedings of BCEC97. Biocomputing and Emergent Computation, P1
  • [6] Holland J.H, 1994, ADAPTATION NATURAL A, P211
  • [7] The particle swarm: Social adaptation of knowledge
    Kennedy, J
    [J]. PROCEEDINGS OF 1997 IEEE INTERNATIONAL CONFERENCE ON EVOLUTIONARY COMPUTATION (ICEC '97), 1997, : 303 - 308
  • [8] Myers R.H., 1995, RESPONSE SURFACE MET, P700
  • [9] MEDIUM OPTIMIZATION BY GENETIC ALGORITHM FOR CONTINUOUS PRODUCTION OF FORMATE DEHYDROGENASE
    WEUSTERBOTZ, D
    WANDREY, C
    [J]. PROCESS BIOCHEMISTRY, 1995, 30 (06) : 563 - 571