Predicted Structure and Functions of the Prototypic Alphaherpesvirus Herpes Simplex Virus Type-1 UL37 Tegument Protein

被引:3
作者
Collantes, Therese Marie A. [1 ,2 ,3 ]
Clark, Carolyn M. [1 ,2 ]
Musarrat, Farhana [1 ,2 ]
Jambunathan, Nithya [4 ]
Jois, Seetharama [5 ]
Kousoulas, Konstantin G. [1 ,2 ]
机构
[1] Louisiana State Univ, Sch Vet Med, Div Biotechnol & Mol Med, Baton Rouge, LA 70803 USA
[2] Louisiana State Univ, Sch Vet Med, Dept Pathobiol Sci, Baton Rouge, LA 70803 USA
[3] Univ Philippines Los Banos, Coll Vet Med, Los Banos 4031, Laguna, Philippines
[4] Indiana Univ, Sch Med, Indianapolis, ID 46202 USA
[5] Univ Louisiana Monroe, Coll Pharm, Sch Basic Pharmaceut & Toxicol Sci, Monroe, LA 71201 USA
来源
VIRUSES-BASEL | 2022年 / 14卷 / 10期
关键词
computational modelling; molecular dynamics simulation; functional modelling; web-based; AlphaFold; herpesvirus; tegument protein; UL37; retrograde transport; PSEUDORABIES VIRUS; MOLECULAR-DYNAMICS; CAPSID TRANSPORT; RIG-I; IDENTIFICATION; LINKERS; PUL37; CONSERVATION; ENVELOPMENT; FLEXIBILITY;
D O I
10.3390/v14102189
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The alphaherpesvirus UL37 tegument protein is a highly conserved, multi-functional protein. Mutagenesis analysis delineated the UL37 domains necessary for retrograde transport and viral replication. Specifically, the amino-terminal 480 amino acids are dispensable for virus replication in epithelial cell culture, but it is unknown whether this amino-terminal deletion affects UL37 structure and intracellular transport in epithelial cells and neurons. To investigate the structure and function of UL37, we utilized multiple computational approaches to predict and characterize the secondary and tertiary structure and other functional features. The structure of HSV-1 UL37 and Delta 481N were deduced using publicly available predictive algorithms. The predicted model of HSV-1 UL37 is a stable, multi-functional, globular monomer, rich in alpha helices, with unfolded regions within the linker and the C-tail domains. The highly flexible C-tail contains predicted binding sites to the dynein intermediate chain, as well as DNA and RNA. Predicted interactions with the cytoplasmic surface of the lipid membrane suggest UL37 is a peripheral membrane protein. The Delta 481N truncation did not alter the predicted structure of the UL37 C-terminus protein and its predicted interaction with dynein. We validated these models by examining the replication kinetics and transport of the Delta 481N virus toward the nuclei of infected epithelial and neuronal cells. The Delta 481N virus had substantial defects in virus spread; however, it exhibited no apparent defects in virus entry and intracellular transport. Using computational analyses, we identified several key features of UL37, particularly the flexible unstructured tail; we then demonstrated that the UL37 C-terminus alone is sufficient to effectively transport the virus towards the nucleus of infected epithelial and neuronal cells.
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页数:21
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