Strategy of Repeats in DNA Sequence Assembly

被引:0
作者
Zhang Yan-an
Xue Min-feng
Li Lin
Han Yue-qi
机构
来源
INFORMATION TECHNOLOGY FOR MANUFACTURING SYSTEMS II, PTS 1-3 | 2011年 / 58-60卷
关键词
sequence assembly; repeat sequence; software Amos;
D O I
10.4028/www.scientific.net/AMM.58-60.927
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
This study is a concentrated at the strategy of repeats in DNA sequence assembly. To deal with the sequences with repeats is a difficult problem in DNA sequence assembly. On basis of strategy learning about masking repeats, this study proposes a method based on mate-pair analysis, and a developing strategy on Amos platform.
引用
收藏
页码:927 / +
页数:2
相关论文
共 10 条
[1]  
[Anonymous], 2001, Nature
[2]  
Bo-feng Zhang, 2002, DEFINED SIZED CHARAC
[3]  
Gibas C., 2002, DEV BIOINFORMATICS C
[4]  
Jun Wang, 2002, GENOME RES
[5]  
Kececioglu J D, 1995, ALGORITHMIC
[6]  
Kui Cai, 2009, COMPUTER PROJECT
[7]  
Li-Ian Tu, 2004, SCIENCE
[8]  
Pevzner P.A., 2001, P NAT ACAD SCI US
[9]  
Pop M, 2004, BRIEFINGS BIOINFORMA
[10]  
[王磊 WANG Lei], 2006, [计算机科学, Computer Science], V33, P164