Mycobacterium syngnathidarum sp. nov., a rapidly growing mycobacterium identified in syngnathid fish

被引:9
作者
Fogeson, Susan B. [1 ]
Camus, Alvin C. [1 ]
Lorenz, Walt [2 ]
Phirips, Ashley [3 ]
Bartlett, Paula [3 ]
Sanchez, Susan [3 ]
机构
[1] Univ Georgia, Coll Vet Med, Dept Pathol, Athens, GA 30602 USA
[2] Univ Georgia, Inst Bioinformat, Athens, GA 30602 USA
[3] Univ Georgia, Coll Vet Med, Dept Infect Dis, Athens, GA 30602 USA
关键词
Mycobacterium; rapidly growing mycobacteria; fish; syngnathids; DNA-DNA HYBRIDIZATION; NONTUBERCULOUS MYCOBACTERIA; RIBOSOMAL-RNA; INFECTION; DISEASE; TOOL;
D O I
10.1099/ijsem.0.002978
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two closely related isolates, 27335(T) and 24999, of rapidly growing, non-pigmented mycobacteria, were cultured from two clinically ill fish of the family Syngnathidae. Whole genome sequencing of the two isolates revealed low sequence homology to documented mycobacteria within public databases such as the NCBI. Evaluation of targeted housekeeping genes, including 16S rRNA, ITS, rpoB and hsp65, related the two bacteria distantly to Mycobacterium senegalense CK2 M4421 and Mycobacterium farcinogenes DSM 43637. Phenotypic, biochemical and dDNA-DNA hybridization tests demonstrated that Mycobacterium syngnathidarum is a new species distinct from other recognized rapidly growing mycobacterial species. Phenotypic, chemotaxonomic and phylogenetic data evaluation provided evidence that the two strains represent one novel species. We propose the formal recognition of Mycobacterium syngnathidarum sp. nov., with isolate 27335(T) as the type strain (=ATCC TSD-89(T) ,=DSM 105112(T)).
引用
收藏
页码:3696 / 3700
页数:5
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