Subpiconewton dynamic force spectroscopy using magnetic tweezers

被引:54
作者
Kruithof, M. [1 ]
Chien, F. [1 ]
de Jager, M. [1 ]
van Noort, J. [1 ]
机构
[1] Leiden Inst Phys, NL-2333 CA Leiden, Netherlands
关键词
D O I
10.1529/biophysj.107.121673
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
We introduce a simple method for dynamic force spectroscopy with magnetic tweezers. This method allows application of subpiconewton force and twist control by calibration of the applied force from the height of the magnets. Initial dynamic force spectroscopy experiments on DNA molecules revealed a large hysteresis that is caused by viscous drag on the magnetic bead and will conceal weak interactions. When smaller beads are used, this hysteresis is sufficiently reduced to reveal intramolecular interactions at subpiconewton forces. Compared with typical quasistatic force spectroscopy, a significant reduction of measurement time is achieved, allowing the real-time study of transient structures and reaction intermediates. As a proof of principle, nucleosome-nucleosome interactions on a subsaturated chromatin fiber were analyzed.
引用
收藏
页码:2343 / 2348
页数:6
相关论文
共 15 条
[1]   Hindered diffusion of colloidal particles very near to a wall: Revisited [J].
Bevan, MA ;
Prieve, DC .
JOURNAL OF CHEMICAL PHYSICS, 2000, 113 (03) :1228-1236
[2]  
BUSTAMANTE C, 1994, SCIENCE, V265, P1600
[3]   Force spectroscopy with single bio-molecules [J].
Clausen-Schaumann, H ;
Seitz, M ;
Krautbauer, R ;
Gaub, HE .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2000, 4 (05) :524-530
[4]   Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure [J].
Cui, Y ;
Bustamante, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (01) :127-132
[5]   Dynamic strength of molecular adhesion bonds [J].
Evans, E ;
Ritchie, K .
BIOPHYSICAL JOURNAL, 1997, 72 (04) :1541-1555
[6]   Magnetic tweezers: Micromanipulation and force measurement at the molecular level [J].
Gosse, C ;
Croquette, V .
BIOPHYSICAL JOURNAL, 2002, 82 (06) :3314-3329
[7]   A method for the in vitro reconstitution of a defined "30 nm" chromatin fibre containing stoichiometric amounts of the linker histone [J].
Huynh, VAT ;
Robinson, PJJ ;
Rhodes, D .
JOURNAL OF MOLECULAR BIOLOGY, 2005, 345 (05) :957-968
[8]   Apparent persistence length renormalization of bent DNA [J].
Kulic, IM ;
Mohrbach, H ;
Lobaskin, V ;
Thaokar, R ;
Schiessel, H .
PHYSICAL REVIEW E, 2005, 72 (04)
[9]   Catalytic activity of the yeast SWI/SNF complex on reconstituted nucleosome arrays [J].
Logie, C ;
Peterson, CL .
EMBO JOURNAL, 1997, 16 (22) :6772-6782
[10]   Crystal structure of the nucleosome core particle at 2.8 angstrom resolution [J].
Luger, K ;
Mader, AW ;
Richmond, RK ;
Sargent, DF ;
Richmond, TJ .
NATURE, 1997, 389 (6648) :251-260