Schizophrenia and vitamin D related genes could have been subject to latitude-driven adaptation

被引:23
作者
Amato, Roberto [1 ,2 ,3 ]
Pinelli, Michele [1 ,4 ]
Monticelli, Antonella [5 ]
Miele, Gennaro [1 ,2 ,3 ]
Cocozza, Sergio [1 ,4 ]
机构
[1] Univ Salerno, Univ Naples Federico II, Grp Interdipartimentale Bioinformat & Biol Comput, Naples, Italy
[2] Univ Naples Federico II, Dipartimento Sci Fis, Naples, Italy
[3] Ist Nazl Fis Nucl, Sez Napoli, Naples, Italy
[4] Univ Naples Federico II, Dipartimento Biol & Patol Cellulare & Mol L Calif, Naples, Italy
[5] CNR Napoli, Ist Endocrinol Oncol Sperimentale, Naples, Italy
关键词
CHROMATIN-REMODELING COMPLEX; CALCINEURIN-A-ALPHA; POPULATION-STRUCTURE; D DEFICIENCY; DROSOPHILA-MELANOGASTER; SYSTEMATIC METAANALYSES; NATURAL-SELECTION; EXPRESSION; RECEPTOR; ASSOCIATION;
D O I
10.1186/1471-2148-10-351
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Many natural phenomena are directly or indirectly related to latitude. Living at different latitudes, indeed, has its consequences with being exposed to different climates, diets, light/dark cycles, etc. In humans, one of the best known examples of genetic traits following a latitudinal gradient is skin pigmentation. Nevertheless, also several diseases show latitudinal clinals such as hypertension, cancer, dismetabolic conditions, schizophrenia, Parkinson's disease and many more. Results: We investigated, for the first time on a wide genomic scale, the latitude-driven adaptation phenomena. In particular, we selected a set of genes showing signs of latitude-dependent population differentiation. The biological characterization of these genes showed enrichment for neural-related processes. In light of this, we investigated whether genes associated to neuropsychiatric diseases were enriched by Latitude-Related Genes (LRGs). We found a strong enrichment of LRGs in the set of genes associated to schizophrenia. In an attempt to try to explain this possible link between latitude and schizophrenia, we investigated their associations with vitamin D. We found in a set of vitamin D related genes a significant enrichment of both LRGs and of genes involved in schizophrenia. Conclusions: Our results suggest a latitude-driven adaptation for both schizophrenia and vitamin D related genes. In addition we confirm, at a molecular level, the link between schizophrenia and vitamin D. Finally, we discuss a model in which schizophrenia is, at least partly, a maladaptive by-product of latitude dependent adaptive changes in vitamin D metabolism.
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页数:12
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共 85 条
[11]   Ontologizer 2.0 - a multifunctional tool for GO term enrichment analysis and data exploration [J].
Bauer, Sebastian ;
Grossmann, Steffen ;
Vingron, Martin ;
Robinson, Peter N. .
BIOINFORMATICS, 2008, 24 (14) :1650-1651
[12]   Systematic meta-analyses of Alzheimer disease genetic association studies: the AlzGene database [J].
Bertram, Lars ;
McQueen, Matthew B. ;
Mullin, Kristina ;
Blacker, Deborah ;
Tanzi, Rudolph E. .
NATURE GENETICS, 2007, 39 (01) :17-23
[13]  
Bussey KJ., 2003, GENOME BIOL, V4
[14]   Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait [J].
Caicedo, AL ;
Stinchcombe, JR ;
Olsen, KM ;
Schmitt, J ;
Purugganan, MD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (44) :15670-15675
[15]   POPULATION STRUCTURE AND HUMAN EVOLUTION [J].
CAVALLIS.LL .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1966, 164 (995) :362-&
[16]   Regulation of seed yield and agronomic characters by photoperiod sensitivity and growth habit genes in soybean [J].
Cober, Elroy R. ;
Morrison, Malcolm J. .
THEORETICAL AND APPLIED GENETICS, 2010, 120 (05) :1005-1012
[17]   Adaptive evolution of genes underlying schizophrenia [J].
Crespi, Bernard ;
Summers, Kyle ;
Dorus, Steve .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2007, 274 (1627) :2801-2810
[18]   Genetic diversity patterns at the human clock gene period 2 are suggestive of population-specific positive selection [J].
Cruciani, Fulvio ;
Trombetta, Beniamino ;
Labuda, Damian ;
Modiano, David ;
Torroni, Antonio ;
Costa, Rodolfo ;
Scozzari, Rosaria .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2008, 16 (12) :1526-1534
[19]   DAVID: Database for annotation, visualization, and integrated discovery [J].
Dennis, G ;
Sherman, BT ;
Hosack, DA ;
Yang, J ;
Gao, W ;
Lane, HC ;
Lempicki, RA .
GENOME BIOLOGY, 2003, 4 (09)
[20]   Differential expression of calcineurin A subunit mRNA isoforms during rat hippocampal and cerebellar development [J].
Eastwood, SL ;
Salih, T ;
Harrison, PJ .
EUROPEAN JOURNAL OF NEUROSCIENCE, 2005, 22 (12) :3017-3024