cryoWriter: a blotting free cryo-EM preparation system with a climate jet and cover-slip injector

被引:5
作者
Rima, Luca [1 ]
Zimmermann, Michael [1 ]
Fraenkl, Andri [2 ]
Clairfeuille, Thomas [3 ]
Lauer, Matthias [3 ]
Engel, Andreas [4 ]
Engel, Hans-Andreas [4 ]
Braun, Thomas [1 ]
机构
[1] Univ Basel, Biozentrum, Spitalstr 41, CH-4056 Basel, Switzerland
[2] Univ Basel, Swiss Nanosci Inst, CH-4056 Basel, Switzerland
[3] Roche Innovat Ctr Basel, Therapeut Modal, Lead Discovery, Roche Pharma Res & Early Dev, Grenzacherstr 124, CH-4070 Basel, Switzerland
[4] CryoWrite Ltd, Klingelbergstr 50, CH-4056 Basel, Switzerland
基金
瑞士国家科学基金会;
关键词
CRYOELECTRON MICROSCOPY; GRAPHENE; SUPPORT; SAMPLES;
D O I
10.1039/d2fd00066k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Electron microscopy (EM) introduced a fast and lasting change to structural and cellular biology. However, the sample preparation is still the bottleneck in the cryogenic electron microscopy (cryo-EM) workflow. Classical specimen preparation methods employ a harsh paper-blotting step, and the protein particles are exposed to a damaging air-water interface. Therefore, improved preparation strategies are urgently needed. Here, we present an amended microfluidic sample preparation method, which entirely avoids paper blotting and allows the passivation of the air-water interface during the preparation process. First, a climate jet excludes oxygen from the sample environment and controls the preparation temperature by varying the relative humidity of the grid environment. Second, the integrated "coverslip injector" allows the modulation of the air-water interface of the thin sample layer with effector molecules. We will briefly discuss the climate jet's effect on the stability and dynamics of the sample thin films. Furthermore, we will address the coverslip injector and demonstrate significant improvement in the sample quality.
引用
收藏
页码:55 / 66
页数:12
相关论文
共 33 条
  • [1] Microscale Fluid Behavior during Cryo-EM Sample Blotting
    Armstrong, Maxim
    Han, Bong-Gyoon
    Gomez, Salvador
    Turner, John
    Fletcher, Daniel A.
    Glaeser, Robert M.
    [J]. BIOPHYSICAL JOURNAL, 2020, 118 (03) : 708 - 719
  • [2] Miniaturizing EM Sample Preparation: Opportunities, Challenges, and "Visual Proteomics"
    Arnold, Stefan A.
    Muller, Shirley A.
    Schmidli, Claudio
    Syntychaki, Anastasia
    Rima, Luca
    Chami, Mohamed
    Stahlberg, Henning
    Goldie, Kenneth N.
    Braun, Thomas
    [J]. PROTEOMICS, 2018, 18 (5-6)
  • [3] Blotting-free and lossless cryo-electron microscopy grid preparation from nanoliter-sized protein samples and single-cell extracts
    Arnold, Stefan A.
    Albiez, Stefan
    Bieri, Andrej
    Syntychaki, Anastasia
    Adaixo, Ricardo
    McLeod, Robert A.
    Goldie, Kenneth N.
    Stahlberg, Henning
    Braun, Thomas
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2017, 197 (03) : 220 - 226
  • [4] Total Sample Conditioning and Preparation of Nanoliter Volumes for Electron Microscopy
    Arnold, Stefan A.
    Albiez, Stefan
    Opara, Nadia
    Chami, Mohamed
    Schmidli, Claudio
    Bieri, Andrej
    Padeste, Celestino
    Stahlberg, Henning
    Braun, Thomas
    [J]. ACS NANO, 2016, 10 (05) : 4981 - 4988
  • [5] Eliminating effects of particle adsorption to the air/water interface in single-particle cryo-electron microscopy: Bacterial RNA polymerase and CHAPSO
    Chen, James
    Noble, Alex J.
    Kang, Jin Young
    Darst, Seth A.
    [J]. JOURNAL OF STRUCTURAL BIOLOGY-X, 2019, 1
  • [6] Protein denaturation at the air-water interface and how to prevent it
    D'Imprima, Edoardo
    Floris, Davide
    Joppe, Mirko
    Sanchez, Ricardo
    Grininger, Martin
    Kuehlbrandt, Werner
    [J]. ELIFE, 2019, 8
  • [7] Time-resolved cryo-EM using Spotiton
    Dandey, Venkata P.
    Budell, William C.
    Wei, Hui
    Bobe, Daija
    Maruthi, Kashyap
    Kopylov, Mykhailo
    Eng, Edward T.
    Kahn, Peter A.
    Hinshaw, Jenny E.
    Kundu, Nidhi
    Nimigean, Crina M.
    Fan, Chen
    Sukomon, Nattakan
    Darst, Seth A.
    Saecker, Ruth M.
    Chen, James
    Malone, Brandon
    Potter, Clinton S.
    Carragher, Bridget
    [J]. NATURE METHODS, 2020, 17 (09) : 897 - +
  • [8] Spotiton: New features and applications
    Dandey, Venkata P.
    Wei, Hui
    Zhang, Zhening
    Tan, Yong Zi
    Acharya, Priyamvada
    Eng, Edward T.
    Rice, William J.
    Kahn, Peter A.
    Potter, Clinton S.
    Carragher, Bridget
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2018, 202 (02) : 161 - 169
  • [9] CRYO-ELECTRON MICROSCOPY OF VITRIFIED SPECIMENS
    DUBOCHET, J
    ADRIAN, M
    CHANG, JJ
    HOMO, JC
    LEPAULT, J
    MCDOWALL, AW
    SCHULTZ, P
    [J]. QUARTERLY REVIEWS OF BIOPHYSICS, 1988, 21 (02) : 129 - 228
  • [10] Architecture and conformational switch mechanism of the ryanodine receptor
    Efremov, Rouslan G.
    Leitner, Alexander
    Aebersold, Ruedi
    Raunser, Stefan
    [J]. NATURE, 2015, 517 (7532) : 39 - U72