MicroRNAs and epigenetics

被引:436
作者
Sato, Fumiaki [1 ]
Tsuchiya, Soken [1 ]
Meltzer, Stephen J. [2 ]
Shimizu, Kazuharu [1 ]
机构
[1] Kyoto Univ, Dept Nanobio Drug Discovery, Grad Sch Pharmaceut Sci, Kyoto 6068501, Japan
[2] Johns Hopkins Univ, Sch Med, Dept Med, Div Gastroenterol & Hepatol, Baltimore, MD 21205 USA
关键词
DNA methylation; epigenetics; histone modification; microRNA; TUMOR-SUPPRESSIVE MICRORNAS; DNA METHYLATION; DOWN-REGULATION; OVARIAN-CANCER; HISTONE METHYLTRANSFERASE; REDUCED EXPRESSION; BINDING-PROTEIN; SKELETAL-MUSCLE; SMALL RNAS; GENE;
D O I
10.1111/j.1742-4658.2011.08089.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MicroRNAs (miRNAs) comprise species of short noncoding RNA that regulate gene expression post-transcriptionally. Recent studies have demonstrated that epigenetic mechanisms, including DNA methylation and histone modification, not only regulate the expression of protein-encoding genes, but also miRNAs, such as let-7a, miR-9, miR-34a, miR-124, miR-137, miR-148 and miR-203. Conversely, another subset of miRNAs controls the expression of important epigenetic regulators, including DNA methyltransferases, histone deacetylases and polycomb group genes. This complicated network of feedback between miRNAs and epigenetic pathways appears to form an epigenetics-miRNA regulatory circuit, and to organize the whole gene expression profile. When this regulatory circuit is disrupted, normal physiological functions are interfered with, contributing to various disease processes. The present minireview details recent discoveries involving the epigenetics-miRNA regulatory circuit, suggesting possible biological insights into gene-regulatory mechanisms that may underlie a variety of diseases.
引用
收藏
页码:1598 / 1609
页数:12
相关论文
共 96 条
[61]   Expanding roles for miRNAs and siRNAs in cell regulation [J].
Nakahara, K ;
Carthew, RW .
CURRENT OPINION IN CELL BIOLOGY, 2004, 16 (02) :127-133
[62]   miR-449a targets HDAC-1 and induces growth arrest in prostate cancer [J].
Noonan, E. J. ;
Place, R. F. ;
Pookot, D. ;
Basak, S. ;
Whitson, J. M. ;
Hirata, H. ;
Giardina, C. ;
Dahiya, R. .
ONCOGENE, 2009, 28 (14) :1714-1724
[63]   MicroRNAs and cardiovascular diseases [J].
Ono, Koh ;
Kuwabara, Yasuhide ;
Han, Jiahuai .
FEBS JOURNAL, 2011, 278 (10) :1619-1633
[64]   Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome [J].
Orban, TI ;
Izaurralde, E .
RNA, 2005, 11 (04) :459-469
[65]   miRNA deregulation by epigenetic silencing disrupts suppression of the oncogene PLAG1 in chronic lymphocytic leukemia [J].
Pallasch, Christian Philipp ;
Patz, Michaela ;
Park, Yoon Jung ;
Hagist, Susanne ;
Eggle, Daniela ;
Claus, Rainer ;
Debey-Pascher, Svenja ;
Schulz, Alexandra ;
Frenzel, Lukas P. ;
Claasen, Julia ;
Kutsch, Nadine ;
Krause, Guenter ;
Mayr, Christine ;
Rosenwald, Andreas ;
Plass, Christoph ;
Schultze, Joachim L. ;
Hallek, Michael ;
Wendtner, Clemens-Martin .
BLOOD, 2009, 114 (15) :3255-3264
[66]   Imprinted noncoding RNAs [J].
Peters, Jo ;
Robson, Joan E. .
MAMMALIAN GENOME, 2008, 19 (7-8) :493-502
[67]   miR-34b Targets Cyclic AMP-Responsive Element Binding Protein in Acute Myeloid Leukemia [J].
Pigazzi, Martina ;
Manara, Elena ;
Baron, Emma ;
Basso, Giuseppe .
CANCER RESEARCH, 2009, 69 (06) :2471-2478
[68]   microRNA target predictions in animals [J].
Rajewsky, Nikolaus .
NATURE GENETICS, 2006, 38 (Suppl 6) :S8-S13
[69]   Epigenetic Regulation of MicroRNAs in Acute Lymphoblastic Leukemia [J].
Roman-Gomez, Jose ;
Agirre, Xabier ;
Jimenez-Velasco, Antonio ;
Arqueros, Victor ;
Vilas-Zornoza, Amaia ;
Rodriguez-Otero, Paula ;
Martin-Subero, Inaki ;
Garate, Leire ;
Cordeu, Lucia ;
Jose-Eneriz, Edurne San ;
Martin, Vanesa ;
Antonio Castillejo, Juan ;
Bandres, Eva ;
Jose Calasanz, Maria ;
Siebert, Reiner ;
Heiniger, Anabel ;
Torres, Antonio ;
Prosper, Felipe .
JOURNAL OF CLINICAL ONCOLOGY, 2009, 27 (08) :1316-1322
[70]   Chromatin remodeling at Alu repeats by epigenetic treatment activates silenced microRNA-512-5p with downregulation of Mcl-1 in human gastric cancer cells [J].
Saito, Y. ;
Suzuki, H. ;
Tsugawa, H. ;
Nakagawa, I. ;
Matsuzaki, J. ;
Kanai, Y. ;
Hibi, T. .
ONCOGENE, 2009, 28 (30) :2738-2744