MicroRNAs and epigenetics

被引:436
作者
Sato, Fumiaki [1 ]
Tsuchiya, Soken [1 ]
Meltzer, Stephen J. [2 ]
Shimizu, Kazuharu [1 ]
机构
[1] Kyoto Univ, Dept Nanobio Drug Discovery, Grad Sch Pharmaceut Sci, Kyoto 6068501, Japan
[2] Johns Hopkins Univ, Sch Med, Dept Med, Div Gastroenterol & Hepatol, Baltimore, MD 21205 USA
关键词
DNA methylation; epigenetics; histone modification; microRNA; TUMOR-SUPPRESSIVE MICRORNAS; DNA METHYLATION; DOWN-REGULATION; OVARIAN-CANCER; HISTONE METHYLTRANSFERASE; REDUCED EXPRESSION; BINDING-PROTEIN; SKELETAL-MUSCLE; SMALL RNAS; GENE;
D O I
10.1111/j.1742-4658.2011.08089.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MicroRNAs (miRNAs) comprise species of short noncoding RNA that regulate gene expression post-transcriptionally. Recent studies have demonstrated that epigenetic mechanisms, including DNA methylation and histone modification, not only regulate the expression of protein-encoding genes, but also miRNAs, such as let-7a, miR-9, miR-34a, miR-124, miR-137, miR-148 and miR-203. Conversely, another subset of miRNAs controls the expression of important epigenetic regulators, including DNA methyltransferases, histone deacetylases and polycomb group genes. This complicated network of feedback between miRNAs and epigenetic pathways appears to form an epigenetics-miRNA regulatory circuit, and to organize the whole gene expression profile. When this regulatory circuit is disrupted, normal physiological functions are interfered with, contributing to various disease processes. The present minireview details recent discoveries involving the epigenetics-miRNA regulatory circuit, suggesting possible biological insights into gene-regulatory mechanisms that may underlie a variety of diseases.
引用
收藏
页码:1598 / 1609
页数:12
相关论文
共 96 条
[1]   Epigenetic Silencing of the Tumor Suppressor MicroRNA Hsa-miR-124a Regulates CDK6 Expression and Confers a Poor Prognosis in Acute Lymphoblastic Leukemia [J].
Agirre, Xabier ;
Vilas-Zornoza, Amaia ;
Jimenez-Velasco, Antonio ;
Ignacio Martin-Subero, Jose ;
Cordeu, Lucia ;
Garate, Leire ;
San Jose-Eneriz, Edurne ;
Abizanda, Gloria ;
Rodriguez-Otero, Paula ;
Fortes, Puri ;
Rifon, Jose ;
Bandres, Eva ;
Jose Calasanz, Maria ;
Martin, Vanesa ;
Heiniger, Anabel ;
Torres, Antonio ;
Siebert, Reiner ;
Roman-Gomez, Jose ;
Prosper, Felipe .
CANCER RESEARCH, 2009, 69 (10) :4443-4453
[2]   A uniform system for microRNA annotation [J].
Ambros, V ;
Bartel, B ;
Bartel, DP ;
Burge, CB ;
Carrington, JC ;
Chen, XM ;
Dreyfuss, G ;
Eddy, SR ;
Griffiths-Jones, S ;
Marshall, M ;
Matzke, M ;
Ruvkun, G ;
Tuschl, T .
RNA, 2003, 9 (03) :277-279
[3]   DNA methylation of microRNA genes in gastric mucosae of gastric cancer patients: Its possible involvement in the formation of epigenetic field defect [J].
Ando, Takayuki ;
Yoshida, Takeichi ;
Enomoto, Shotaro ;
Asada, Kiyoshi ;
Tatematsu, Masae ;
Ichinose, Masao ;
Sugiyama, Toshiro ;
Ushijima, Toshikazu .
INTERNATIONAL JOURNAL OF CANCER, 2009, 124 (10) :2367-2374
[4]   Epigenetic regulation of microRNA expression in colorectal cancer [J].
Bandres, Eva ;
Agirre, Xabier ;
Bitarte, Nerea ;
Ramirez, Natalia ;
Zarate, Ruth ;
Roman-Gomez, Jose ;
Prosper, Felipe ;
Garcia-Foncillas, Jesus .
INTERNATIONAL JOURNAL OF CANCER, 2009, 125 (11) :2737-2743
[5]   MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004) [J].
Bartel, David P. .
CELL, 2007, 131 (04) :11-29
[6]   MRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes [J].
Behm-Ansmant, Isabelle ;
Rehwinkel, Jan ;
Doerks, Tobias ;
Stark, Alexander ;
Bork, Peer ;
Izaurralde, Elisa .
GENES & DEVELOPMENT, 2006, 20 (14) :1885-1898
[7]   MicroRNA-137 targets microphthalmia-associated transcription factor in melanoma cell lines [J].
Bemis, Lynne T. ;
Chen, Robert ;
Amato, Carol M. ;
Classen, Elizabeth H. ;
Robinson, Steven E. ;
Coffey, David G. ;
Erickson, Paul F. ;
Shellman, Yiqun G. ;
Robinson, William A. .
CANCER RESEARCH, 2008, 68 (05) :1362-1368
[8]   Aberrant Epigenetic Landscape in Cancer: How Cellular Identity Goes Awry [J].
Berdasco, Maria ;
Esteller, Manel .
DEVELOPMENTAL CELL, 2010, 19 (05) :698-711
[9]   The human let-7a-3 locus contains an epigenetically regulated microRNA gene with oncogenic function [J].
Brueckner, Bodo ;
Stresemann, Carlo ;
Kuner, Ruprecht ;
Mund, Cora ;
Musch, Tanja ;
Meister, Michael ;
Sueltmann, Holger ;
Lyko, Frank .
CANCER RESEARCH, 2007, 67 (04) :1419-1423
[10]   Genetic and epigenetic silencing of microRNA-203 enhances ABL1 and BCR-ABL1 oncogene expression [J].
Bueno, Maria J. ;
Perez de Castro, Ignacio ;
de Cedron, Marta Gomez ;
Santos, Javier ;
Calin, George A. ;
Cigudosa, Juan C. ;
Croce, Carlo M. ;
Fernandez-Piqueras, Jose ;
Malumbres, Marcos .
CANCER CELL, 2008, 13 (06) :496-506