Molecular cloning and characterization of a novel Y-box gene from Sepiella maindroni

被引:1
作者
Si, H. P. [1 ]
Wang, C. L. [1 ]
Zhang, Y. Y. [1 ]
Mu, C. K. [1 ]
Zhan, P. P. [1 ]
Li, R. H. [1 ]
Song, W. W. [1 ]
机构
[1] Ningbo Univ, Key Lab, Minist Educ Appl Marine Biotechnol, Ningbo 315211, Zhejiang, Peoples R China
来源
GENETICS AND MOLECULAR RESEARCH | 2015年 / 14卷 / 02期
基金
中国国家自然科学基金;
关键词
Sepiella maindroni (SmYB); Y-box; Gene cloning; mRNA expression; Embryonic development; Cold shock; COLD-SHOCK PROTEIN; ESCHERICHIA-COLI; BINDING-PROTEIN; MESSENGER-RNA; MOUSE OOCYTES; YB-1; FAMILY; CSPA; EXPRESSION; TRANSCRIPTION;
D O I
10.4238/2015.May.29.7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Y-box proteins are a family of highly conserved nucleic acid binding proteins that interact with genome and transcription product to modulate the transcriptional and translational processes. In the present study, a complete mRNA of Y-box binding protein (designated SmYB) was obtained from Sepiella maindroni by amplification of flanking sequences. The full size of SmYB cDNA was 1502 bp, including 99 bp at the 5. untranslated region (UTR), a 3' UTR of 821 bp with a poly (A) tail, and an open reading frame of 582 bp, encoding a polypeptide of 193 amino acids with the predicted molecular weight of 16.48 kDa. The conserved cold-shock domain and two known RNA binding motifs identified in SmYB strongly suggested that SmYB was a new member of Y-box proteins. Quantitative real-time PCR was performed to examine the expression of SmYB mRNA in various tissues, embryos, and its temporal expression in liver after cold shock. The mRNA transcript of SmYB was detected in all examined tissues, with the highest expression level in testis and ovary. SmYB was abundant in early developmental stages of S. maindroni embryos but diminished in the late post-embryonic development. In addition, cold-shock treatment upregulated the transcription of SmYB mRNA in liver. These results demonstrated that SmYB is involved in embryonic development of S. maindroni and its tolerance to acute low temperatures.
引用
收藏
页码:5750 / 5762
页数:13
相关论文
共 43 条
  • [1] ExPASy: SIB bioinformatics resource portal
    Artimo, Panu
    Jonnalagedda, Manohar
    Arnold, Konstantin
    Baratin, Delphine
    Csardi, Gabor
    de Castro, Edouard
    Duvaud, Severine
    Flegel, Volker
    Fortier, Arnaud
    Gasteiger, Elisabeth
    Grosdidier, Aurelien
    Hernandez, Celine
    Ioannidis, Vassilios
    Kuznetsov, Dmitry
    Liechti, Robin
    Moretti, Sebastien
    Mostaguir, Khaled
    Redaschi, Nicole
    Rossier, Gregoire
    Xenarios, Ioannis
    Stockinger, Heinz
    [J]. NUCLEIC ACIDS RESEARCH, 2012, 40 (W1) : W597 - W603
  • [2] Inhibition of protein synthesis by Y box-binding protein 1 blocks oncogenic cell transformation
    Bader, AG
    Vogt, PK
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 2005, 25 (06) : 2095 - 2106
  • [3] Improved prediction of signal peptides: SignalP 3.0
    Bendtsen, JD
    Nielsen, H
    von Heijne, G
    Brunak, S
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2004, 340 (04) : 783 - 795
  • [4] BOUVET P, 1995, J BIOL CHEM, V270, P28297
  • [5] CONSERVED STRUCTURES AND DIVERSITY OF FUNCTIONS OF RNA-BINDING PROTEINS
    BURD, CG
    DREYFUSS, G
    [J]. SCIENCE, 1994, 265 (5172) : 615 - 621
  • [6] Evaluation of the Schistosoma mansoni Y-box-binding protein (SMYB1) potential as a vaccine candidate against schistosomiasis
    Dias, Silvia R. C.
    Boroni, Mariana
    Rocha, Elizangela A.
    Dias, Thomaz L.
    Souza, Daniela de Laet
    Oliveira, Fabricio M. S.
    Bitar, Maina
    Macedo, Andrea M.
    Machado, Carlos R.
    Caliari, Marcelo V.
    Franco, Gloria R.
    [J]. FRONTIERS IN GENETICS, 2014, 5
  • [7] CHARACTERIZATION OF THE CDNA-ENCODING A PROTEIN-BINDING TO THE MAJOR HISTOCOMPATIBILITY COMPLEX CLASS-II Y-BOX
    DIDIER, DK
    SCHIFFENBAUER, J
    WOULFE, SL
    ZACHEIS, M
    SCHWARTZ, BD
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (19) : 7322 - 7326
  • [8] The major mRNA-associated protein YBA is a potent 5′ cap-dependent mRNA stabilizer
    Evdokimova, V
    Ruzanov, P
    Imataka, H
    Raught, B
    Svitkin, Y
    Ovchinnikov, LP
    Sonenberg, N
    [J]. EMBO JOURNAL, 2001, 20 (19) : 5491 - 5502
  • [9] Pre-mRNA splicing and human disease
    Faustino, NA
    Cooper, TA
    [J]. GENES & DEVELOPMENT, 2003, 17 (04) : 419 - 437
  • [10] YB-11s upregulated during prostate cancer tumor progression and increases P-glycoprotein activity
    Giménez-Bonafé, P
    Fedoruk, MN
    Whitmore, TG
    Akbari, M
    Ralph, JL
    Ettinger, S
    Gleave, ME
    Nelson, CC
    [J]. PROSTATE, 2004, 59 (03) : 337 - 349