A systematic review and meta-analysis of host genetic factors associated with influenza severity

被引:5
作者
Van Goethem, Nina [1 ,2 ]
Danwang, Celestin [2 ]
Bossuyt, Nathalie [1 ]
Van Oyen, Herman [1 ,3 ]
Roosens, Nancy H. C. [4 ]
Robert, Annie [2 ]
机构
[1] Sciensano, Sci Directorate Epidemiol & Publ Hlth, J Wytsmanstr 14, B-1050 Brussels, Belgium
[2] Catholic Univ Louvain, Dept Epidemiol & Biostat, Inst Rech Expt & Clin, Fac Publ Hlth, Clos Chapelle Champs 30, B-1200 Brussels, Belgium
[3] Univ Ghent, Dept Publ Hlth & Primary Care, Pintelaan 185, B-9000 Ghent, Belgium
[4] Sciensano, Transversal Act Appl Genom, J Wytsmanstr 14, B-1050 Brussels, Belgium
关键词
Polymorphism; Influenza severity; Association; meta-analysis; CCR5-DELTA-32; RS333; POLYMORPHISM; A H1N1 VIRUS; PREDISPOSING FACTOR; IFITM3; SUSCEPTIBILITY; OUTCOMES; RISK; PATHOGENESIS; ILLNESS; BINDING;
D O I
10.1186/s12864-021-08240-7
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background The severity of influenza disease can range from mild symptoms to severe respiratory failure and can partly be explained by host genetic factors that predisposes the host to severe influenza. Here, we aimed to summarize the current state of evidence that host genetic variants play a role in the susceptibility to severe influenza infection by conducting a systematic review and performing a meta-analysis for all markers with at least three or more data entries. Results A total of 34 primary human genetic association studies were identified that investigated a total of 20 different genes. The only significant pooled ORs were retrieved for the rs12252 polymorphism: an overall OR of 1.52 (95% CI [1.06-2.17]) for the rs12252-C allele compared to the rs12252-T allele. A stratified analysis by ethnicity revealed opposite effects in different populations. Conclusion With exception for the rs12252 polymorphism, we could not identify specific genetic polymorphisms to be associated with severe influenza infection in a pooled meta-analysis. This advocates for the use of large, hypothesis-free, genome-wide association studies that account for the polygenic nature and the interactions with other host, pathogen and environmental factors.
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页数:10
相关论文
共 77 条
[1]   Determinants of Fatal Outcome in Patients Admitted to Intensive Care Units With Influenza, European Union 2009-2017 [J].
Adlhoch, Cornelia ;
Dias, Joana Gomes ;
Bonmarin, Isabelle ;
Hubert, Bruno ;
Larrauri, Amparo ;
Oliva Dominguez, Jesus A. ;
Delgado-Sanz, Concepcion ;
Brytting, Mia ;
Carnahan, AnnaSara ;
Popovici, Odette ;
Lupulescu, Emilia ;
O'Donnell, Joan ;
Domegan, Lisa ;
van Gageldonk-Lafeber, Arianne B. ;
Meijer, Adam ;
Kyncl, Jan ;
Slezak, Pavel ;
Guiomar, Raquel ;
Orta Gomes, Carlos M. ;
Popow-Kraupp, Theresia ;
Mikas, Jan ;
Staronova, Edita ;
Melillo, Jackie M. ;
Melillo, Tanya ;
Ikonen, Niina ;
Lyytikainen, Outi ;
Snacken, Rene ;
Penttinen, Pasi .
OPEN FORUM INFECTIOUS DISEASES, 2019, 6 (11)
[2]   Human genetics of infectious diseases: between proof of principle and paradigm [J].
Alcais, Alexandre ;
Abel, Laurent ;
Casanova, Jean-Laurent .
JOURNAL OF CLINICAL INVESTIGATION, 2009, 119 (09) :2506-2514
[3]   SNP-mediated disruption of CTCF binding at the IFITM3 promoter is associated with risk of severe influenza in humans [J].
Allen, E. Kaitlynn ;
Randolph, Adrienne G. ;
Bhangale, Tushar ;
Dogra, Pranay ;
Ohlson, Maikke ;
Oshansky, Christine M. ;
Zamora, Anthony E. ;
Shannon, John P. ;
Finkelstein, David ;
Dressen, Amy ;
DeVincenzo, John ;
Caniza, Miguela ;
Youngblood, Ben ;
Rosenberger, Carrie M. ;
Thomas, Paul G. .
NATURE MEDICINE, 2017, 23 (08) :975-+
[4]  
[Anonymous], 2012, NATURE, DOI DOI 10.1038/nature11632
[5]   Role of tumor necrosis factor gene single nucleotide polymorphisms in the natural course of 2009 influenza A H1N1 virus infection [J].
Antonopoulou, Anastasia ;
Baziaka, Fotini ;
Tsaganos, Thomas ;
Raftogiannis, Maria ;
Koutoukas, Pantelis ;
Spyridaki, Aikaterini ;
Mouktaroudi, Maria ;
Kotsaki, Antigone ;
Savva, Athina ;
Georgitsi, Marianna ;
Giamarellos-Bourboulis, Evangelos J. .
INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES, 2012, 16 (03) :E204-E208
[6]   TESTS FOR LINEAR TRENDS IN PROPORTIONS AND FREQUENCIES [J].
ARMITAGE, P .
BIOMETRICS, 1955, 11 (03) :375-386
[7]   Host genetic susceptibility to viral infections: the role of type I interferon induction [J].
Bourdon, Marie ;
Manet, Caroline ;
Montagutelli, Xavier .
GENES AND IMMUNITY, 2020, 21 (6-8) :365-379
[8]   The IFITM Proteins Mediate Cellular Resistance to Influenza A H1N1 Virus, West Nile Virus, and Dengue Virus [J].
Brass, Abraham L. ;
Huang, I-Chueh ;
Benita, Yair ;
John, Sinu P. ;
Krishnan, Manoj N. ;
Feeley, Eric M. ;
Ryan, Bethany J. ;
Weyer, Jessica L. ;
van der Weyden, Louise ;
Fikrig, Erol ;
Adams, David J. ;
Xavier, Ramnik J. ;
Farzan, Michael ;
Elledge, Stephen J. .
CELL, 2009, 139 (07) :1243-1254
[9]   The Lower Serum Immunoglobulin G2 Level in Severe Cases than in Mild Cases of Pandemic H1N1 2009 Influenza Is Associated with Cytokine Dysregulation [J].
Chan, Jasper Fuk-Woo ;
To, Kelvin Kai-Wang ;
Tse, Herman ;
Lau, Candy Choi-Yi ;
Li, Iris Wai-Sum ;
Hung, Ivan Fan-Ngai ;
Chan, Kwok-Hung ;
Cheng, Vincent Chi-Chung ;
Lai, Thomas Sik-To ;
Woo, Patrick Chiu-Yat ;
Chan, Eric Yuk-Tat ;
Yuen, Kwok-Yung .
CLINICAL AND VACCINE IMMUNOLOGY, 2011, 18 (02) :305-310
[10]   Identification of complement-related host genetic risk factors associated with influenza A(H1N1)pdm09 outcome: challenges ahead [J].
Chatzopoulou, Fani ;
Gioula, Georgia ;
Kioumis, Ioannis ;
Chatzidimitriou, Dimitris ;
Exindari, Maria .
MEDICAL MICROBIOLOGY AND IMMUNOLOGY, 2019, 208 (05) :631-640