Genetic structure and relationships among Melissa officinalis accessions using AFLP markers

被引:1
作者
Danaeipour, Zahra [1 ]
Fotokian, Mohammad Hossein [2 ]
Talei, Daryush [3 ]
Naji, Amir Mohammad [2 ]
机构
[1] Imam Khomeini Int Univ, Fac Agr Sci & Nat Resources, Dept Biotechnol, Qazvin, Iran
[2] Shahed Univ, Fac Agr, Tehran, Iran
[3] Shahed Univ, Med Plants Res Ctr, Tehran, Iran
关键词
Genetic diversity; Molecular marker; Medicinal plants; Fingerprinting; ROSMARINIC ACID; SSR MARKERS; DIVERSITY; BALM; RAPD; PLANT; L; GERMPLASM; NUMBER;
D O I
10.1016/j.bcab.2019.101416
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Melissa officinalis, a member of the Lamiaceae family, is one of the most important medicinal herbs that are applied in different fields of industry worldwide. Genetic diversity and structure of 21 M. officinalis accessions were examined using amplified fragment length polymorphism (AFLP) markers. For this purpose, 15 primer combinations generated a total of 1592 scorable bands, of which 1402 bands were polymorphic. The primer combination P-66/M-48 showed the highest markers polymorphism values (PIC = 0.28, DI = 0.34, and I = 0.51), while the lowest values (PIC = 0.17, DI = 0.20, and I = 0.32) is obtained from the P-14/M-49 combination. The marker index (MI) values with an average of 18.46 showed high values for both primer combinations E/M and P/ M. All of the accessions, based on Neighbor-Net clustering method and structure analysis, are assigned to five clusters; with the maximum genetic dissimilarity of 0.51 belonging to accessions from Gilan (Roodbar and Damash). In addition, the principal coordinate analysis (PCoA) data confirmed the results of the clustering. In this study, the genetic distance was not often related to geographical distance. More likely the relationship among them is due to seed dispersal through human interactions. Our findings indicate that high genetic diversity of M. officinalis accessions provides important baseline data and a better understanding of conservation, management, and collection strategies for germplasm of this species.
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页数:7
相关论文
共 37 条
[1]  
Acquaah G., 2009, Principles of Plant Genetics and Breeding
[2]  
Aharizad S., 2012, Annals of Biological Research, V3, P5748
[3]  
[Anonymous], 2002, PLANT CELL TISSUE OR, DOI DOI 10.1023/A:1013359015812
[4]  
Bagdat R. B., 2006, Ondokuz Mayis Universitesi, Ziraat Fakultesi Dergisi, V21, P116
[5]   Comparative study of the discriminating capacity of RAPD, AFLP and SSR markers and of their effectiveness in establishing genetic relationships in olive [J].
Belaj, A ;
Satovic, Z ;
Cipriani, G ;
Baldoni, L ;
Testolin, R ;
Rallo, L ;
Trujillo, I .
THEORETICAL AND APPLIED GENETICS, 2003, 107 (04) :736-744
[6]   Cultivar affects the phenolic composition and antioxidant properties of commercially available lemon balm (Melissa officinalis L.) varieties [J].
Boneza, Maxime M. ;
Niemeyer, Emily D. .
INDUSTRIAL CROPS AND PRODUCTS, 2018, 112 :783-789
[7]  
BOTSTEIN D, 1980, AM J HUM GENET, V32, P314
[8]   Genetic diversity and population structure of the endangered alpine quillwort Isoetes hypsophila Hand.-Mazz. revealed by AFLP markers [J].
Chen, Yuan-Yuan ;
Liao, Li ;
Li, Wei ;
Li, Zuo-Zhou .
PLANT SYSTEMATICS AND EVOLUTION, 2010, 290 (1-4) :127-139
[9]  
Danaeipour Z, 2016, J BIODIVERS ENVIRON, V8, P88
[10]   Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study [J].
Evanno, G ;
Regnaut, S ;
Goudet, J .
MOLECULAR ECOLOGY, 2005, 14 (08) :2611-2620