Definition of Late Onset Alzheimer's Disease and Anticipation Effect of Genome-Wide Significant Risk Variants: Pilot Study of the APOE e4 Allele

被引:11
作者
DeLuca, Vincenzo [1 ]
Spalletta, Gianfranco [2 ]
Souza, Renan P. [3 ]
Graff, Ariel [1 ]
Bastos-Rodrigues, Luciana [3 ]
Camargos Bicalho, Maria Aparecida [3 ]
机构
[1] Univ Toronto, Dept Psychiat, CAMH, Toronto, ON, Canada
[2] IRCCS Santa Lucia Fdn, Rome, Italy
[3] Univ Fed Minas Gerais, Belo Horizonte, MG, Brazil
关键词
Alzheimer's disease; Age at onset; Admixture analysis; Apolipoprotein E; Genome-wide association study; APOLIPOPROTEIN-E; POPULATIONS; FREQUENCY;
D O I
10.1159/000490739
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Background/Objectives: This study aims to investigate the role of apolipoprotein E (APOE) e4 influencing the age at onset (AAO) of Alzheimer's disease (AD). In AD, the AAO of dementia varies from 40 to 90 years. Usually, AD patients who develop symptoms before the age of 65 are considered as early-onset AD (EOAD). However, considering the heterogeneity of the AD onset, the definition of late-onset AD (LOAD) cannot rely on an arbitrary cut-off. Thus, we aim to validate the anticipation effect of the APOE e4 allele in LOAD. Methods/Overview: Firstly, the optimal number of AAO subgroups was determined using MCLUST for 3 AD samples from Italy, Brazil, and from the ADNI consortium. MCLUST selects the best-fitting model based on the Bayesian information criterion (BIC), and the ideal cut-off for separating early onset from late onset in each sample. Then, when the AAO was modeled for each sample, the finite mixture model (FMM) analysis was used to analyze the effect of the APOE e4 in determining the risk for anticipated onset in LOAD. For the Brazilian sample, the ancestry was incorporated as a covariate. The FMM results from the 3 samples were meta-analyzed using METAL. Results: We performed the AAO analysis on the APOE e4 in 474 Italian patients enrolled at the IRCCS Santa Lucia Foundation in Italy, 135 AD from the Outpatients Reference Center for Geriatrics from the Federal University of Minas Gerais in Brazil, and 376 from the ADNI consortium. Using this distribution model, we found that the specific LOAD cut-off was 64 for the Italian sample, 67 for the ADNI sample, and 74 for the Brazilian sample. The APOE e4 showed a significant anticipatory effect specific for LOAD in all 3 samples. The METAL analysis for the anticipatory e4 effect was genome-wide significant when analyzing the LOAD effect size under the fixed model (beta = -8.1; p < 0.0001). However, when analyzing EOAD there was no genome-wide significant anticipation effect (beta = 1.9244; p = 0.0219). Conclusions: This study showed that the mixture analysis can refine the ideal cut-off for defining LOAD as a homogeneous genetic entity. We also validated the e4 allele anticipatory effect only in LOAD. In summary, the tool developed in this study is a sophisticated statistical pipeline to analyze the AAO in genome-wide association studies of AD, to find new molecular targets as a new line of translational research to foster drug discovery.
引用
收藏
页码:8 / 12
页数:5
相关论文
共 17 条
  • [1] American Psychiatric Association, 2000, FORCE DSM 4 DSM 4 T, V4th ed., DOI 10.1176/dsm10.1176/appi.books.9780890420249.dsm-iv-tr
  • [2] The genetic structure of human populations studied through short insertion-deletion polymorphisms
    Bastos-Rodrigues, Luciana
    Pimenta, Juliana R.
    Pena, Sergio D. J.
    [J]. ANNALS OF HUMAN GENETICS, 2006, 70 : 658 - 665
  • [3] Sociodemographic characteristics, clinical factors, and genetic polymorphisms associated with Alzheimer's disease
    Camargos Bicalho, Maria Aparecida
    Pimenta, Fausto Aloisio
    Bastos-Rodrigues, Luciana
    Hansen, Erika de Oliveira
    Neves, Samara Cangucu
    Melo, Marina
    Rosa, Daniela Valadao
    de Souza, Renan Pedra
    de Miranda, Debora Marques
    de Moraes, Edgar Nunes
    Romano-Silva, Marco Aurelio
    De Marco, Luiz
    [J]. INTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY, 2013, 28 (06) : 640 - 646
  • [4] Apolipoprotein E (APOE) allele distribution in the world.: Is APOE*4 a 'thrifty' allele?
    Corbo, RM
    Scacchi, R
    [J]. ANNALS OF HUMAN GENETICS, 1999, 63 : 301 - 310
  • [5] De Luca V, 2017, 9 CAN C DEM TOR NOV
  • [6] Inverse effect of the APOE epsilon4 allele in late- and early-onset Alzheimer's disease
    De Luca, Vincenzo
    Orfei, Maria Donata
    Gaudenzi, Sara
    Caltagirone, Carlo
    Spalletta, Gianfranco
    [J]. EUROPEAN ARCHIVES OF PSYCHIATRY AND CLINICAL NEUROSCIENCE, 2016, 266 (07) : 599 - 606
  • [7] The effect of job loss on overweight and drinking
    Deb, Partha
    Gallo, William T.
    Ayyagari, Padmaja
    Fletcher, Jason M.
    Sindelar, Jody L.
    [J]. JOURNAL OF HEALTH ECONOMICS, 2011, 30 (02) : 317 - 327
  • [8] Enhanced model-based clustering, density estimation, and discriminant analysis software: MCLUST
    Fraley, C
    Raftery, AE
    [J]. JOURNAL OF CLASSIFICATION, 2003, 20 (02) : 263 - 286
  • [9] The apolipoprotein E polymorphism in Greenland Inuit in its global perspective
    Gerdes, LU
    Gerdes, C
    Hansen, PS
    Klausen, IC
    Faergeman, O
    Dyerberg, J
    [J]. HUMAN GENETICS, 1996, 98 (05) : 546 - 550
  • [10] Apolipoprotein E4: A causative factor and therapeutic target in neuropathology including Alzheimer's disease
    Mahley, RW
    Weisgraber, KH
    Huang, YD
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (15) : 5644 - 5651