Semi-rational engineering of a Kluyveromyces lactis aldo-keto reductase KlAKR for improved catalytic efficiency towards t-butyl 6-cyano-(3R, 5R)-dihydroxyhexanoate

被引:11
作者
Shen, Wei [1 ,2 ,3 ]
Chen, Yi [1 ,2 ,3 ]
Qiu, Shuai [1 ,2 ,3 ]
Wang, Dan-Na [1 ,2 ,3 ]
Wang, Ya-Jun [1 ,2 ,3 ]
Zheng, Yu-Guo [1 ,2 ,3 ]
机构
[1] Zhejiang Univ Technol, Coll Biotechnol & Bioengn, Key Lab Bioorgan Synth Zhejiang Prov, Hangzhou 310014, Zhejiang, Peoples R China
[2] Zhejiang Univ Technol, Minist Educ, Engn Res Ctr Bioconvers & Biopurificat, Hangzhou 310014, Zhejiang, Peoples R China
[3] Zhejiang Univ Technol, Natl & Local Joint Engn Res Ctr Biomfg Chiral Che, Hangzhou 310014, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
Aldo-keto reductase; t-Butyl; 6-cyano-(3R; 5R)-dihydroxyhexanoate; Diastereoselectivity; Site-saturation mutagenesis; CARBONYL REDUCTASE; ALCOHOL-DEHYDROGENASE; NITRILE HYDRATASE; ACTIVE-SITE; DESIGN; THERMOSTABILITY; BIOSYNTHESIS; COLI; ENANTIOSELECTIVITY; BIOREDUCTION;
D O I
10.1016/j.enzmictec.2019.109413
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
t-Butyl 6-cyano-(3R,5R)-dihydroxyhexanoate ((3R,5R)-2) is an important building-block of atorvastatin. In our previous work, a variant KlAKR-Y295W-W296 L (designated as M1) of Kluyveromyces lactis aldo-keto reductase (wild type (WT) KlAKR, M0) was developed, which possessed strict diastereoselectivity but moderate activity towards t-butyl 6-cyano-(5R)-hydroxy-3-oxohexanoate ((5R)-1). To further improve its catalytic performance, semi-rational engineering of M1 was performed in present work, and the "best" varaint KlAKR-Y295W-W296L-1125V-S30P-Q212R-163W (M8) was developed. M8's K-m(B) towards (5R)-1 was 2.02 mM, and the catalytic efficiency (k(cat)/K-m(B)) value was 36.31 s(-1) mM(-1), which was 1.9-fold higher than that of the parent M1. Compared with M1, the half-life t(1/)(2), T(S50)(50)and T(P50)(50)of M8 were improved. Under the optimized conditions, (5R)-1 at load of up to 80 g L-1 was completely reduced in 1.5 h by M8 along with Exiguobacterium sibiricum glucose dehydrogenase (EsGDH) for cofactor regeneration, producing (3R,5R)-2 in de(p) > 99.5% and space-time yields (STY) of 660.0 g L(-1)d(-1).
引用
收藏
页数:9
相关论文
共 57 条
[1]   Computational studies of the mechanism for proton and hydride transfer in liver alcohol dehydrogenase [J].
Agarwal, PK ;
Webb, SP ;
Hammes-Schiffer, S .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (19) :4803-4812
[2]   Efficacy and safety of a new HMG-CoA reductase inhibitor, atorvastatin, in patients with hypertriglyceridemia [J].
BakkerArkema, RG ;
Davidson, MH ;
Goldstein, RJ ;
Davignon, J ;
Isaacsohn, JL ;
Weiss, SR ;
Keilson, LM ;
Brown, WV ;
Miller, VT ;
Shurzinske, LJ ;
Black, DM .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 1996, 275 (02) :128-133
[3]   Stabilizing biocatalysts [J].
Bommarius, Andreas S. ;
Paye, Marietou F. .
CHEMICAL SOCIETY REVIEWS, 2013, 42 (15) :6534-6565
[4]   Structural and catalytic effects of proline substitution and surface loop deletion in the extended active site of human carbonic anhydrase II [J].
Boone, Christopher D. ;
Rasi, Valerio ;
Tu, Chingkuang ;
McKenna, Robert .
FEBS JOURNAL, 2015, 282 (08) :1445-1457
[5]  
Cao H., 2011, BIORESOUR TECHNOL, V102
[6]   Loop engineering reveals the importance of active-site-decorating loops and gating residue in substrate affinity modulation of arginine deiminase (an anti-tumor enzyme) [J].
Cheng, Feng ;
Yang, Jianhua ;
Bocola, Marco ;
Schwaneberg, Ulrich ;
Zhu, Leilei .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2018, 499 (02) :233-238
[7]   Identification of key residues modulating the stereoselectivity of nitrile hydratase toward rac-mandelonitrile by semi-rational engineering [J].
Cheng, Zhongyi ;
Peplowski, Lukasz ;
Cui, Wenjing ;
Xia, Yuanyuan ;
Liu, Zhongmei ;
Zhang, Jialei ;
Kobayashi, Michihiko ;
Zhou, Zhemin .
BIOTECHNOLOGY AND BIOENGINEERING, 2018, 115 (03) :524-535
[8]   Industrial applications of enzyme biocatalysis: Current status and future aspects [J].
Choi, Jung-Min ;
Han, Sang-Soo ;
Kim, Hak-Sung .
BIOTECHNOLOGY ADVANCES, 2015, 33 (07) :1443-1454
[9]   Towards the computational design and engineering of enzyme enantioselectivity: A case study by a carbonyl reductase from Gluconobacter oxydans [J].
Deng, Jian ;
Yao, Zhiqiang ;
Chen, Kangling ;
Yuan, Y. Adam ;
Lin, Jinping ;
Wei, Dongzhi .
JOURNAL OF BIOTECHNOLOGY, 2016, 217 :31-40
[10]   Extremozymes - biocatalysts with unique properties from extremophilic microorganisms [J].
Elleuche, Skander ;
Schroeder, Carola ;
Sahm, Kerstin ;
Antranikian, Garabed .
CURRENT OPINION IN BIOTECHNOLOGY, 2014, 29 :116-123