Supramolecular chemistry in silico

被引:11
作者
Sheehan, Rosemary [1 ]
Cragg, Peter J. [1 ]
机构
[1] Univ Brighton, Sch Pharm & Biomol Sci, Brighton BN2 4GJ, E Sussex, England
关键词
supramolecular complexes; computational chemistry; macrocycles; molecular simulation;
D O I
10.1080/10610270701302465
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Computational protocols capable of modelling supramolecular complexes have been evaluated. The complexation of cations by crown ethers and quaternary ammonium ions by an oxacalix[3]arene are presented as examples. In the latter case reliable qualitative results were obtained using the semi-empirical PM3 method where guest LUMO and electrostatic potential energies have been shown to correlate with experimental binding data. The optimal method for more accurate results combines semi-empirical equilibrium geometry and property calculations with single point energy calculations at the HF/6-31G* or BP/6-31G* quantum mechanical level.
引用
收藏
页码:443 / 451
页数:9
相关论文
共 41 条
[1]   Cooperative anion binding and electrochemical sensing by modular podands [J].
Abouderbala, LO ;
Belcher, WJ ;
Boutelle, MG ;
Cragg, PJ ;
Steed, JW ;
Turner, DR ;
Wallace, KJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (08) :5001-5006
[2]   Impact of the solvent on the conformational isomerism of calix[4]arenes:: A study based on continuum solvation models [J].
Alemán, C ;
den Otter, WK ;
Tolpekina, TV ;
Briels, WJ .
JOURNAL OF ORGANIC CHEMISTRY, 2004, 69 (03) :951-958
[3]   Cation-ether complexes in the gas phase: thermodynamic insight into molecular recognition [J].
Armentrout, PB .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 1999, 193 (2-3) :227-240
[4]   GIAO-DFT calculated and experimentally derived complexation-induced chemical shifts of calix[4]arene-solvent inclusion complexes [J].
Backes, AC ;
Schatz, J ;
Siehl, HU .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 2002, (03) :484-488
[5]   CONFORMATIONAL STUDY OF THE MACROCYCLE 1,4,7-TRITHIACYCLONONANE IN METAL-COMPLEXES [J].
BEECH, J ;
CRAGG, PJ ;
DREW, MGB .
JOURNAL OF THE CHEMICAL SOCIETY-DALTON TRANSACTIONS, 1994, (05) :719-729
[6]   Theoretical investigations of self-organising donor-acceptor aromatic systems [J].
Cooray, AS ;
de Silva, KMN .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2004, 678 (1-3) :223-231
[7]  
Cragg PJ, 2005, PRACTICAL GUIDE TO SUPRAMOLECULAR CHEMISTRY, P1, DOI 10.1002/047086656X
[8]   Conformational preferences of O-substituted oxacalix[3]arenes [J].
Cragg, PJ ;
Drew, MGB ;
Steed, JW .
SUPRAMOLECULAR CHEMISTRY, 1999, 11 (01) :5-15
[9]   Selectivity of calix [4] tubes towards metal ions: A molecular dynamics study [J].
Felix, V ;
Matthews, SE ;
Beer, PD ;
Drew, MGB .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2002, 4 (15) :3849-3858
[10]   Proton tunneling in calix[4]arenes:: a theoretical investigation [J].
Fernández-Ramos, A ;
Smedarchina, Z ;
Pichierri, F .
CHEMICAL PHYSICS LETTERS, 2001, 343 (5-6) :627-632