Complete mitochondrial genomes for Cottus asper, Cottus perifretum, and Cottus rhenanus (Perciformes, Cottidae)

被引:8
作者
Fast, Kayla [1 ]
Aguilar, Andres [2 ]
Nolte, Arne W. [3 ]
Sandel, Michael W. [1 ]
机构
[1] Univ West Alabama, Dept Biol & Environm Sci, Livingston, AL 35470 USA
[2] Calif State Univ Los Angeles, Dept Biol Sci, Los Angeles, CA 90032 USA
[3] Carl von Ossietzky Univ Oldenburg, Dept Ecol Genom, Oldenburg, Germany
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2017年 / 2卷 / 02期
基金
美国国家科学基金会;
关键词
Sculpin; Cottus asper; Cottus perifretum; Cottus rhenanus; mitochondrial genome;
D O I
10.1080/23802359.2017.1375870
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Freshwater sculpins represent a diverse but poorly-understood constituent of the Holarctic ichthyofauna. Sculpins are considered sensitive to pollution and habitat change, serving as aquatic bioindicators in ecotoxicology. Many species are protected by conservation agencies, due to anthropogenic activity within restricted geographic distributions. Here, we provide the first complete mitochondrial DNA sequences for three freshwater sculpins (Cottus asper, C. perifretum, C. rhenanus). These data are used to infer an updated mtDNA phylogeny for the genus Cottus, which supports results of previous research. These data are likely to be useful for future studies in biogeography, conservation, and functional genomics.
引用
收藏
页码:666 / 668
页数:3
相关论文
共 13 条
[1]   Complete mitochondrial genome of the Amur sculpin Cottus szanaga (Cottoidei: Cottidae) [J].
Balakirev, Evgeniy S. ;
Saveliev, Pavel A. ;
Ayala, Francisco J. .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :737-738
[2]   Impact of dams on distribution, population structure, and hybridization of two species of California freshwater sculpin (Cottus) [J].
Baumsteiger, Jason ;
Aguilar, Andres .
CONSERVATION GENETICS, 2014, 15 (03) :729-742
[3]  
Boschung H.T., 2004, FISHES ALABAMA
[4]  
Freyhof J, 2005, ICHTHYOL EXPLOR FRES, V16, P107
[5]   Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach [J].
Hahn, Christoph ;
Bachmann, Lutz ;
Chevreux, Bastien .
NUCLEIC ACIDS RESEARCH, 2013, 41 (13) :e129
[6]  
Hall T., 2004, BIOEDIT VERSION 7 0
[7]   The complete mitochondrial genome of Cherskii's sculpin (Cottus czerskii) (Scorpaeniformes: Cottidae) [J].
Han, Xiaomin ;
Li, Cheng ;
Zhao, Shuai ;
Xu, Chunzhu .
MITOCHONDRIAL DNA PART A, 2016, 27 (04) :2629-2630
[8]  
International Union for Conservation of Nature and Natural Resources, 2016, IUCN RED LIST THREAT
[9]  
Krejsa RJ, 1965, THESIS
[10]  
Kumar S, 2000, MOL EVOLUTION PHYLOG