A Systematic Analysis of Interactions between Environmental Risk Factors and Genetic Variation in Susceptibility to Colorectal Cancer

被引:19
|
作者
Yang, Tian [1 ,2 ]
Li, Xue [1 ]
Farrington, Susan M. [2 ,3 ]
Dunlop, Malcolm G. [2 ,3 ]
Campbell, Harry [1 ]
Timofeeva, Maria [2 ,3 ]
Theodoratou, Evropi [1 ,2 ]
机构
[1] Univ Edinburgh, Usher Inst, Ctr Global Hlth, Edinburgh, Midlothian, Scotland
[2] Univ Edinburgh, Western Gen Hosp, Med Res Council,Colon Canc Genet Grp, Inst Genet & Mol Med,Canc Res UK Edinburgh Ctr, Edinburgh, Midlothian, Scotland
[3] Univ Edinburgh, Western Gen Hosp, Med Res Council, Inst Genet & Mol Med,Human Genet Unit, Edinburgh, Midlothian, Scotland
关键词
SAMPLE-SIZE REQUIREMENTS; GENOME-WIDE ASSOCIATION; CUMULATIVE EVIDENCE; KNOWLEDGE; LOCI;
D O I
10.1158/1055-9965.EPI-19-1328
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: The underlying etiology of colorectal cancer includes both genetic variation and environmental exposures. The main aim of this study was to search for interaction effects between well-established environmental risk factors and published common genetic variants exerting main effects on colorectal cancer risk. Methods: We used a two-phase approach: (i) discovery phase (2,652 incident colorectal cancer cases and 10,608 controls from UK Biobank) and (ii) validation phase (1,656 cases and 2,497 controls from the Study of Colorectal Cancer in Scotland). Interactions with nominal P < 0.05 in phase I were taken forward for validation in phase II. Furthermore, we constructed a weighted genetic risk score (GRS) of colorectal cancer risk for each individual and studied interactions between the GRS and the environmental risk factors. Results: Seventy of the 1,500 tested interactions were nominally significant in phase I. After testing these 70 interactions in phase II, an interaction between rs11903757 (2q32.3) and body mass index (BMI) was nominally significant (P = 0.02) with the same direction of effect. The rs11903757*BMI interaction was also significant (ratio of ORs = 1.26; 95% confidence interval, 1.10-1.44; P-interaction = 6.03 x 10(-4); P-heterogeneity = 0.63) in a meta-analysis combining results from both phases. No interactions were significant in phase II after accounting for multiple testing. No interactions involving the GRS were found with statistical significance. Conclusions: Limited evidence of gene-environment interactions in colorectal cancer risk was observed. There are potential modifications of the rs11903757 effect by BMI on colorectal cancer risk. Impact: Our findings might contribute to identifying subpopulations with different susceptibility to the effect of BMI on colorectal cancer risk.
引用
收藏
页码:1145 / 1153
页数:9
相关论文
共 50 条
  • [31] Interactions between the lipidome and genetic and environmental factors in autism
    Chloe X. Yap
    Anjali K. Henders
    Gail A. Alvares
    Corey Giles
    Kevin Huynh
    Anh Nguyen
    Leanne Wallace
    Tiana McLaren
    Yuanhao Yang
    Leanna M. Hernandez
    Michael J. Gandal
    Narelle K. Hansell
    Dominique Cleary
    Rachel Grove
    Claire Hafekost
    Alexis Harun
    Helen Holdsworth
    Rachel Jellett
    Feroza Khan
    Lauren P. Lawson
    Jodie Leslie
    Mira Levis Frenk
    Anne Masi
    Nisha E. Mathew
    Melanie Muniandy
    Michaela Nothard
    Jessica L. Miller
    Lorelle Nunn
    Lachlan T. Strike
    Gemma Cadby
    Eric K. Moses
    Greig I. de Zubicaray
    Paul M. Thompson
    Katie L. McMahon
    Margaret J. Wright
    Peter M. Visscher
    Paul A. Dawson
    Cheryl Dissanayake
    Valsamma Eapen
    Helen S. Heussler
    Andrew J. O. Whitehouse
    Peter J. Meikle
    Naomi R. Wray
    Jacob Gratten
    Nature Medicine, 2023, 29 : 936 - 949
  • [32] Genetic and environmental risk factors for testicular cancer
    Richiardi, Lorenzo
    Pettersson, Andreas
    Akre, Olof
    INTERNATIONAL JOURNAL OF ANDROLOGY, 2007, 30 (04): : 230 - 240
  • [33] Environmental and genetic risk factors for gastric cancer
    Shah, Dhavan
    Bentrem, David
    JOURNAL OF SURGICAL ONCOLOGY, 2022, 125 (07) : 1096 - 1103
  • [34] Evaluation of genetic and environmental factors for cancer risk
    Usui, Yoshiaki
    Matsuo, Keitaro
    Momozawa, Yukihide
    CANCER SCIENCE, 2024, 115 : 443 - 443
  • [35] Testicular cancer: genetic and environmental risk factors
    Jouannet, P.
    BASIC AND CLINICAL ANDROLOGY, 2012, 22 : 10 - 19
  • [36] Genetic susceptibility association between viral infection and colorectal cancer risk: a two-sample Mendelian randomization analysis
    Li, Gen
    Wang, Siyu
    Ma, Jianli
    Liu, Shanshan
    INFECTIOUS AGENTS AND CANCER, 2024, 19 (01):
  • [37] Effect of Interactions Between Validated Rheumatoid Arthritis Genetic Factors and Environmental Factors On Rheumatoid Arthritis Risk
    Chen, Chia-Yen
    Hiraki, Linda T.
    Malspeis, Susan
    Cui, Jing
    Lu, Bing
    Plenge, Robert M.
    Costenbader, Karen H.
    Karlson, Elizabeth W.
    ARTHRITIS AND RHEUMATISM, 2012, 64 (10): : S423 - S423
  • [38] Genetic variation of XPA gene and risk of cancer: A systematic review and pooled analysis
    Ding, Dapeng
    Zhang, Ying
    Yu, Hailang
    Guo, Yunbo
    Jiang, Ling
    He, Xiaofeng
    Ma, Wenli
    Zheng, Wenling
    INTERNATIONAL JOURNAL OF CANCER, 2012, 131 (02) : 488 - 496
  • [39] Investigation of gene-environment interactions between 47 newly identified breast cancer susceptibility loci and environmental risk factors
    Rudolph, Anja
    Milne, Roger L.
    Truong, Therese
    Knight, Julia A.
    Seibold, Petra
    Flesch-Janys, Dieter
    Behrens, Sabine
    Eilber, Ursula
    Bolla, Manjeet K.
    Wang, Qin
    Dennis, Joe
    Dunning, Alison M.
    Shah, Mitul
    Munday, Hannah R.
    Darabi, Hatef
    Eriksson, Mikael
    Brand, Judith S.
    Olson, Janet
    Vachon, Celine M.
    Hallberg, Emily
    Esteban Castelao, J.
    Carracedo, Angel
    Torres, Maria
    Li, Jingmei
    Humphreys, Keith
    Cordina-Duverger, Emilie
    Menegaux, Florence
    Flyger, Henrik
    Nordestgaard, Borge G.
    Nielsen, Sune F.
    Yesilyurt, Betul T.
    Floris, Giuseppe
    Leunen, Karin
    Engelhardt, Ellen G.
    Broeks, Annegien
    Rutgers, Emiel J.
    Glendon, Gord
    Mulligan, Anna Marie
    Cross, Simon
    Reed, Malcolm
    Gonzalez-Neira, Anna
    Arias Perez, Jose Ignacio
    Provenzano, Elena
    Apicella, Carmel
    Southey, Melissa C.
    Spurdle, Amanda
    Haeberle, Lothar
    Beckmann, Matthias W.
    Ekici, Arif B.
    Dieffenbach, Aida Karina
    INTERNATIONAL JOURNAL OF CANCER, 2015, 136 (06) : E685 - E696
  • [40] Risk Factors of Colorectal Cancer in Africa: A Systematic Review and Meta-Analysis
    Tazinkeng, Nkengeh N.
    Pearlstein, Ethan F.
    Manda-Mapalo, Martha
    Adekunle, Ayooluwatomiwa D.
    Sawyer, Kelsey
    Monteiro, Joao Filipe G.
    Bains, Kanwal
    Chukwudike, Evaristus
    Mohamed, Mouhand F.
    Egboh, Stella-Maris C.
    Asante, Comfort
    Asombang, Akwi W.
    AMERICAN JOURNAL OF GASTROENTEROLOGY, 2022, 117 (10): : S181 - S181