A Systematic Analysis of Interactions between Environmental Risk Factors and Genetic Variation in Susceptibility to Colorectal Cancer

被引:19
|
作者
Yang, Tian [1 ,2 ]
Li, Xue [1 ]
Farrington, Susan M. [2 ,3 ]
Dunlop, Malcolm G. [2 ,3 ]
Campbell, Harry [1 ]
Timofeeva, Maria [2 ,3 ]
Theodoratou, Evropi [1 ,2 ]
机构
[1] Univ Edinburgh, Usher Inst, Ctr Global Hlth, Edinburgh, Midlothian, Scotland
[2] Univ Edinburgh, Western Gen Hosp, Med Res Council,Colon Canc Genet Grp, Inst Genet & Mol Med,Canc Res UK Edinburgh Ctr, Edinburgh, Midlothian, Scotland
[3] Univ Edinburgh, Western Gen Hosp, Med Res Council, Inst Genet & Mol Med,Human Genet Unit, Edinburgh, Midlothian, Scotland
关键词
SAMPLE-SIZE REQUIREMENTS; GENOME-WIDE ASSOCIATION; CUMULATIVE EVIDENCE; KNOWLEDGE; LOCI;
D O I
10.1158/1055-9965.EPI-19-1328
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: The underlying etiology of colorectal cancer includes both genetic variation and environmental exposures. The main aim of this study was to search for interaction effects between well-established environmental risk factors and published common genetic variants exerting main effects on colorectal cancer risk. Methods: We used a two-phase approach: (i) discovery phase (2,652 incident colorectal cancer cases and 10,608 controls from UK Biobank) and (ii) validation phase (1,656 cases and 2,497 controls from the Study of Colorectal Cancer in Scotland). Interactions with nominal P < 0.05 in phase I were taken forward for validation in phase II. Furthermore, we constructed a weighted genetic risk score (GRS) of colorectal cancer risk for each individual and studied interactions between the GRS and the environmental risk factors. Results: Seventy of the 1,500 tested interactions were nominally significant in phase I. After testing these 70 interactions in phase II, an interaction between rs11903757 (2q32.3) and body mass index (BMI) was nominally significant (P = 0.02) with the same direction of effect. The rs11903757*BMI interaction was also significant (ratio of ORs = 1.26; 95% confidence interval, 1.10-1.44; P-interaction = 6.03 x 10(-4); P-heterogeneity = 0.63) in a meta-analysis combining results from both phases. No interactions were significant in phase II after accounting for multiple testing. No interactions involving the GRS were found with statistical significance. Conclusions: Limited evidence of gene-environment interactions in colorectal cancer risk was observed. There are potential modifications of the rs11903757 effect by BMI on colorectal cancer risk. Impact: Our findings might contribute to identifying subpopulations with different susceptibility to the effect of BMI on colorectal cancer risk.
引用
收藏
页码:1145 / 1153
页数:9
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