Novel nested patch-based feature extraction model for automated Parkinson's Disease symptom classification using MRI images

被引:33
作者
Kaplan, Ela [1 ]
Altunisik, Erman [2 ]
Firat, Yasemin Ekmekyapar [3 ]
Barua, Prabal Datta [4 ,5 ]
Dogan, Sengul [6 ]
Baygin, Mehmet [7 ]
Demir, Fahrettin Burak [8 ]
Tuncer, Turker [6 ]
Palmer, Elizabeth [9 ,10 ]
Tan, Ru-San [11 ,12 ]
Yu, Ping [13 ]
Soar, Jeffrey [4 ]
Fujita, Hamido [14 ,15 ,16 ]
Acharya, U. Rajendra [4 ,17 ,18 ,19 ,20 ]
机构
[1] Adiyaman Training & Res Hosp, Dept Radiol, Adiyaman, Turkey
[2] Adiyaman Univ Med Fac, Dept Neurol, Adiyaman, Turkey
[3] SANKO Univ Med Fac, Dept Neurol, Gaziantep, Turkey
[4] Univ Southern Queensland, Sch Business Informat Syst, Toowoomba, Qld 4350, Australia
[5] Univ Technol Sydney, Fac Engn & Informat Technol, Sydney, NSW 2007, Australia
[6] Firat Univ, Coll Technol, Dept Digital Forens Engn, Elazig, Turkey
[7] Ardahan Univ, Coll Engn, Dept Comp Engn, Ardahan, Turkey
[8] Bandirma Onyedi Eylul Univ, Fac Engn & Nat Sci, Dept Software Engn, Bandirma, Turkey
[9] Sydney Childrens Hosp Network, Ctr Clin Genet, Randwick, NSW 2031, Australia
[10] UNSW, Fac Med & Hlth, Sch Clin Med Randwick, Discipline Paediat & Child Hlth, Randwick, NSW 2031, Australia
[11] Natl Heart Ctr Singapore, Dept Cardiol, Singapore, Singapore
[12] Duke NUS Med Sch, Singapore, Singapore
[13] Univ Wollongong, Sch Comp & Informat Technol, Wollongong, NSW 2522, Australia
[14] HUTECH Univ Technol, Fac Informat Technol, Ho Chi Minh City, Vietnam
[15] Univ Granada, Andalusian Res Inst Data Sci & Computat Intelligen, Granada, Spain
[16] Iwate Prefectural Univ, Reg Res Ctr, Iwate, Japan
[17] Ngee Ann Polytech, Dept Elect & Comp Engn, Singapore 599489, Singapore
[18] SUSS Univ, Sch Sci & Technol, Dept Biomed Engn, Singapore, Singapore
[19] Asia Univ, Dept Biomed Informat & Med Engn, Taichung, Taiwan
[20] Kumamoto Univ, Int Res Org Adv Sci & Technol IROAST, Kumamoto, Japan
关键词
PD image classification; Nested patch division; Local binary pattern; Local phase quantization; Neighborhood component analysis; Image classification; DIFFERENTIAL-DIAGNOSIS; FEATURE-SELECTION;
D O I
10.1016/j.cmpb.2022.107030
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Objective: Parkinson's disease (PD) is a common neurological disorder with variable clinical manifes-tations and magnetic resonance imaging (MRI) findings. We propose a handcrafted image classification model that can accurately (i) classify different PD stages, (ii) detect comorbid dementia, and (iii) discrim-inate PD-related motor symptoms.Methods: Selected image datasets from three PD studies were used to develop the classification model. Our proposed novel automated system was developed in four phases: (i) texture features are extracted from the non-fixed size patches. In the feature extraction phase, a pyramid histogram-oriented gradient (PHOG) image descriptor is used. (ii) In the feature selection phase, four feature selectors: neighborhood component analysis (NCA), Chi2, minimum redundancy maximum relevancy (mRMR), and ReliefF are used to generate four feature vectors. (iii) Two classifiers: k-nearest neighbor (kNN) and support vector machine (SVM) are used in the classification step. A ten-fold cross-validation technique is used to validate the results. (iv) Eight predicted vectors are generated using four selected feature vectors and two classi-fiers. Finally, iterative majority voting (IMV) is used to attain general classification results. Therefore, this model is named nested patch-PHOG-multiple feature selectors and multiple classifiers-IMV (NP-PHOG-MFSMCIMV).Results: Our presented NP-PHOG-MFSMCIMV model achieved 99.22, 98.70, and 99.53% accuracies for the collected PD stages, PD dementia, and PD symptoms classification datasets, respectively.Significance: The obtained accuracies (over 98% for all states) demonstrated the performance of developed NP-PHOG-MFSMCIMV model in automated PD state classification.(c) 2022 Elsevier B.V. All rights reserved.
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页数:11
相关论文
共 58 条
[1]   A systematic review of prevalence studies of dementia in Parkinson's disease [J].
Aarsland, D ;
Zaccai, J ;
Brayne, C .
MOVEMENT DISORDERS, 2005, 20 (10) :1255-1263
[2]   Diagnosis and Treatment of Parkinson Disease A Review [J].
Armstrong, Melissa J. ;
Okun, Michael S. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2020, 323 (06) :548-560
[3]   Dopamine transporter imaging as a diagnostic tool for parkinsonism and related disorders in clinical practice [J].
Ba, Fang ;
Martin, W. R. Wayne .
PARKINSONISM & RELATED DISORDERS, 2015, 21 (02) :87-94
[4]   A novel PBL-McRBFN-RFE approach for identification of critical brain regions responsible for Parkinson's disease [J].
Babu, Giduthuri Sateesh ;
Suresh, Sundaram ;
Mahanand, Belathur Suresh .
EXPERT SYSTEMS WITH APPLICATIONS, 2014, 41 (02) :478-488
[5]   Imaging the Substantia Nigra in Parkinson Disease and Other Parkinsonian Syndromes [J].
Bae, Yun Jung ;
Kim, Jong-Min ;
Sohn, Chul-Ho ;
Choi, Ji-Hyun ;
Choi, Byung Se ;
Song, Yoo Sung ;
Nam, Yoonho ;
Cho, Se Jin ;
Jeon, Beomseok ;
Kim, Jae Hyoung .
RADIOLOGY, 2021, 300 (02) :260-278
[6]   Novel automated PD detection system using aspirin pattern with EEG signals [J].
Barua, Prabal Datta ;
Dogan, Sengul ;
Tuncer, Turker ;
Baygin, Mehmet ;
Acharya, U. Rajendra .
COMPUTERS IN BIOLOGY AND MEDICINE, 2021, 137
[7]   Exemplar Darknet19 feature generation technique for automated kidney stone detection with coronal CT images [J].
Baygin, Mehmet ;
Yaman, Orhan ;
Barua, Prabal Datta ;
Dogan, Sengul ;
Tuncer, Turker ;
Acharya, U. Rajendra .
ARTIFICIAL INTELLIGENCE IN MEDICINE, 2022, 127
[8]  
Bhuvaji S., 2020, Kaggle
[9]  
Bhuvaji S., 2019, Brain tumor classification (MRI)
[10]   White matter lesions in Parkinson disease [J].
Bohnen, Nicolaas I. ;
Albin, Roger L. .
NATURE REVIEWS NEUROLOGY, 2011, 7 (04) :229-236