The first complete mitochondrial genome of Dictyosquilla foveolata (Stomatopoda: Squillidae) using next-generation sequencing

被引:0
作者
Zhou, Shanshan [1 ]
Zhang, Yazhou [1 ]
Xu, Kaida [1 ]
Liang, Jun [1 ]
Li, Pengfei [1 ]
机构
[1] Marine Fisheries Res Inst Zhejiang, Zhoushan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 12期
基金
国家重点研发计划;
关键词
Dictyosquilla foveolata; mitogenome; phylogenetic analysis; next-generation sequencing;
D O I
10.1080/23802359.2021.1997103
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Dictyosquilla foveolata is a moderately important commercial species that is naturally distributed from Australia to Borneo, and from northwest Indonesia to Burma, Vietnam, and China. The complete mitogenome sequence of D. foveolata was first determined using Illumina HiSeq sequencing in this study. The circular genome was 15,733 bp in length and consisted of 13 protein-coding genes and 2 ribosomal RNA genes, 22 transfer RNA genes. The mitochondrial gene arrangement of D. foveolata is similar to those of most other stomatopods. Results from maximum-likelihood phylogenetic analysis showed that D. foveolata was clustered with other six species of the family Squillidae. This study will be valuable for phylogenetic analyses of the genus Dictyosquilla and the other genera of the order Stomatopoda. This is the first record of the complete mitogenome for the genus Dictyosquilla.
引用
收藏
页码:3411 / 3412
页数:2
相关论文
共 6 条
  • [1] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
    Bankevich, Anton
    Nurk, Sergey
    Antipov, Dmitry
    Gurevich, Alexey A.
    Dvorkin, Mikhail
    Kulikov, Alexander S.
    Lesin, Valery M.
    Nikolenko, Sergey I.
    Son Pham
    Prjibelski, Andrey D.
    Pyshkin, Alexey V.
    Sirotkin, Alexander V.
    Vyahhi, Nikolay
    Tesler, Glenn
    Alekseyev, Max A.
    Pevzner, Pavel A.
    [J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) : 455 - 477
  • [2] Feller KD, 2013, ZOOTAXA, V3722, P22
  • [3] SPATIO-TEMPORAL PATTERNS OF STOMATOPODS (MALACOSTRACA, STOMATOPODA) IN THE MAIN BAYS OF GUANGDONG PROVINCE, CHINA
    Huang, Jianrong
    Wang, Bo
    Yang, Tingbao
    [J]. CRUSTACEANA, 2009, 82 (08) : 1029 - 1043
  • [4] Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]
  • [5] DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
    Kundu, Shantanu
    Rath, Shibananda
    Tyagi, Kaomud
    Chakraborty, Rajasree
    Pakrashi, Avas
    Kumar, Vikas
    Chandra, Kailash
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 955 - 958
  • [6] The complete mitochondrial genome ofLophosquillia costata(Malacostraca: Stomatopoda) from China and phylogeny of stomatopods
    Zhang, Yazhou
    Bi, Yuanxin
    Feng, Meiping
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2495 - 2497