Cytometry-acquired calcium-flux data analysis in activated lymphocytes

被引:32
作者
Kaposi, A. S. [1 ]
Veress, G. [2 ]
Vasarhelyi, B. [1 ]
Macardle, P. [3 ,4 ]
Bailey, S. [3 ,4 ]
Tulassay, T. [1 ]
Treszl, A. [1 ]
机构
[1] Semmelweis Univ, Hungarian Acad Sci, Res Grp Pediat & Nephrol, H-1083 Budapest, Hungary
[2] Analytix Ltd, Cent Intelligence Unit, H-1115 Budapest, Hungary
[3] Flinders Med Ctr, Dept Immunol Allergy & Arthritis, Bedford Pk, SA 5042, Australia
[4] Flinders Univ S Australia, Bedford Pk, SA 5042, Australia
关键词
activation; calcium flux; data analysis; hormesis function; flow cytometry; Jurkat cells; T-lymphocytes;
D O I
10.1002/cyto.a.20518
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Flow cytometry enables the sequential determination of calcium levels in millions of stimulated lymphocytes over a short period of time. Current algorithms available are not suitable for the statistical analysis of this large amount of data. The authors aimed to develop a robust algorithm that fits a function to median values of measured data and provides an opportunity for statistical comparison between different calcium-flux measurements. The alteration of calcium signal was monitored in CD4+ cells loaded with calcium binding fluorescent dyes and stimulated with phytohemagglutinin; the alteration of calcium signal was monitored for 10 minutes. The authors also reanalyzed published calcium-flux data of CD3+ cells and Jurkat cells stimulated with different concentrations of anti-CD3 and thapsigargin. The authors fitted different functions to the medians of data per time unit and identified hormesis function as the best fitting one. On the basis of the optimally fitting function, the authors calculated the most relevant biological descriptors such as starting value, peak, time to reach the maximum, and time to reach 50% of maximum before and after the peak. Statistically significant differences in cell activation kinetics at different stimulatory concentrations were also demonstrated. This approach enables us to characterize the kinetics and distribution of calcium-flux data derived by flow cytometry and may be a reliable tool for the characterization of lymphocyte activation (for details see: http://calciumflux.intralab.eu). (c) 2008 International Society for Analytical Cytology.
引用
收藏
页码:246 / 253
页数:8
相关论文
共 20 条
[1]  
[Anonymous], R LANG ENV STAT COMP
[2]   A flow cytometric comparison of Indo-1 to fluo-3 and Fura Red excited with low power lasers for detecting Ca2+ flux [J].
Bailey, Sheree ;
Macardle, Peter J. .
JOURNAL OF IMMUNOLOGICAL METHODS, 2006, 311 (1-2) :220-225
[3]   Increasing physicians' awareness of the impact of statistics on research outcomes: Comparative power of the t-test and Wilcoxon rank-sum test in small samples applied research [J].
Bridge, PD ;
Sawilowsky, SS .
JOURNAL OF CLINICAL EPIDEMIOLOGY, 1999, 52 (03) :229-235
[4]   Defining hormesis [J].
Calabrese, EJ ;
Baldwin, LA .
HUMAN & EXPERIMENTAL TOXICOLOGY, 2002, 21 (02) :91-97
[5]   Immunodeficiency is a tough nut to CRAC: The importance of calcium flux in T cell activation [J].
Carroll, Helen R. ;
McNaull, Benjamin B. A. ;
Gadina, Massimo .
MOLECULAR INTERVENTIONS, 2006, 6 (05) :253-+
[6]  
GRYNKIEWICZ G, 1985, J BIOL CHEM, V260, P3440
[7]  
JUNE CH, 2004, CURR PROTOCOLS IMMUN, V1, P20
[8]   Leukotriene D4 enhances immunoglobulin production in CD40-activated human B lymphocytes [J].
Lamoureux, J ;
Stankova, J ;
Rola-Pleszczynski, M .
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2006, 117 (04) :924-930
[9]  
MINTA A, 1989, J BIOL CHEM, V264, P8171
[10]   T-cell activation through the antigen receptor. Part 2: Role of signaling cascades in T-cell differentiation, anergy, immune senescence, and development of immunotherapy [J].
Nel, AE ;
Slaughter, N .
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2002, 109 (06) :901-915