Data assimilation and multisource decision-making in systems biology based on unobtrusive Internet-of-Things devices

被引:6
作者
Tang, Wei-Hua [1 ]
Ho, Wen-Hsien [2 ,3 ]
Chen, Yenming J. [4 ]
机构
[1] Natl Yang Ming Univ Hosp, Div Cardiol, Dept Internal Med, Yilan, Taiwan
[2] Kaohsiung Med Univ, Dept Healthcare Adm & Med Informat, Kaohsiung, Taiwan
[3] Kaohsiung Med Univ Hosp, Dept Med Res, Kaohsiung, Taiwan
[4] Natl Kaohsiung Univ Sci & Technol, Dept Logist Management, Kaohsiung, Taiwan
关键词
Multisource evidence; Data assimilation; Systems biology; Pervasive sensing; Bayesian network; Machine learning; PERSONALIZED MEDICINE; WHEEZE DETECTION; DIAGNOSIS; MODEL; FRAMEWORK; BIOINFORMATICS; TECHNOLOGY; MANAGEMENT; INFERENCE; DISEASE;
D O I
10.1186/s12938-018-0574-5
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Biological and medical diagnoses depend on high-quality measurements. A wearable device based on Internet of Things (IoT) must be unobtrusive to the human body to encourage users to accept continuous monitoring. However, unobtrusive IoT devices are usually of low quality and unreliable because of the limitation of technology progress that has slowed down at high peak. Therefore, advanced inference techniques must be developed to address the limitations of IoT devices. This review proposes that IoT technology in biological and medical applications should be based on a new data assimilation process that fuses multiple data scales from several sources to provide diagnoses. Moreover, the required technologies are ready to support the desired disease diagnosis levels, such as hypothesis test, multiple evidence fusion, machine learning, data assimilation, and systems biology. Furthermore, cross-disciplinary integration has emerged with advancements in IoT. For example, the multiscale modeling of systems biology from proteins and cells to organs integrates current developments in biology, medicine, mathematics, engineering, artificial intelligence, and semiconductor technologies. Based on the monitoring objectives of IoT devices, researchers have gradually developed ambulant, wearable, noninvasive, unobtrusive, low-cost, and pervasive monitoring devices with data assimilation methods that can overcome the limitations of devices in terms of quality measurement. In the future, the novel features of data assimilation in systems biology and ubiquitous sensory development can describe patients' physical conditions based on few but long-term measurements.
引用
收藏
页数:13
相关论文
共 95 条
[61]   Computational modelling of atherosclerosis [J].
Parton, Andrew ;
McGilligan, Victoria ;
O'Kane, Maurice ;
Baldrick, Francina R. ;
Watterson, Steven .
BRIEFINGS IN BIOINFORMATICS, 2016, 17 (04) :562-575
[62]  
Pentland A, 2015, STUD HLTH TECHNOL IN, V118, P55
[63]   Theory and developments in an unobtrusive cardiovascular system representation: Ballistocardiography [J].
Pinheiro E. ;
Postolache O. ;
Girão P. .
Open Biomedical Engineering Journal, 2010, 4 (SPEC. ISSUE 2) :201-216
[64]   Cost-efficient speckle interferometry with plastic optical fiber for unobtrusive monitoring of human vital signs [J].
Podbreznik, Peter ;
Donlagic, Denis ;
Lesnik, Dejan ;
Cigale, Boris ;
Zazula, Damjan .
JOURNAL OF BIOMEDICAL OPTICS, 2013, 18 (10)
[65]   Validation of computerized wheeze detection in young infants during the first months of life [J].
Puder, Lia C. ;
Fischer, Hendrik S. ;
Wilitzki, Silke ;
Usemann, Jakob ;
Godfrey, Simon ;
Schmalisch, Gerd .
BMC PEDIATRICS, 2014, 14
[66]   Examining the Impact of Prior Models in Transmural Electrophysiological Imaging: A Hierarchical Multiple-Model Bayesian Approach [J].
Rahimi, Azar ;
Sapp, John ;
Xu, Jingjia ;
Bajorski, Peter ;
Horacek, Milan ;
Wang, Linwei .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2016, 35 (01) :229-243
[67]   Home monitoring remote control of pacemaker and implantable cardioverter defibrillator patients in clinical practice: impact on medical management and health-care resource utilization [J].
Ricci, Renato Pietro ;
Morichetli, Loredana ;
Santini, Massimo .
EUROPACE, 2008, 10 (02) :164-170
[68]   Incorporating prior knowledge improves detection of differences in bacterial growth rate [J].
Rickett, Lydia M. ;
Pullen, Nick ;
Hartley, Matthew ;
Zipfel, Cyril ;
Kamoun, Sophien ;
Baranyi, Jozsef ;
Morris, Richard J. .
BMC SYSTEMS BIOLOGY, 2015, 9
[69]   Computer-aided diagnosis of pneumonia in patients with chronic obstructive pulmonary disease [J].
Sanchez Morillo, Daniel ;
Leon Jimenez, Antonio ;
Astorga Moreno, Sonia .
JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION, 2013, 20 (E1) :E111-E117
[70]   Chemical Data Assimilation-An Overview [J].
Sandu, Adrian ;
Chai, Tianfeng .
ATMOSPHERE, 2011, 2 (03) :426-463