SUMO Safeguards Somatic and Pluripotent Cell Identities by Enforcing Distinct Chromatin States

被引:94
作者
Cossec, Jack-Christophe [1 ,2 ]
Theurillat, Ilan [1 ,2 ,3 ]
Chica, Claudia [4 ,5 ]
Aguin, Sabela Bua [6 ,7 ]
Gaume, Xavier [8 ,11 ]
Andrieux, Alexandra [1 ,2 ]
Iturbide, Ane [8 ]
Jouvion, Gregory [9 ]
Li, Han [6 ,7 ]
Bossis, Guillaume [10 ]
Seeler, Jacob-Sebastian [1 ,2 ]
Torres-Padilla, Maria-Elena [8 ]
Dejean, Anne [1 ,2 ]
机构
[1] Inst Pasteur, Nucl Org & Oncogenesis Unit, Equipe Labellisee Ligue Natl Canc, F-75015 Paris, France
[2] INSERM, U993, F-75015 Paris, France
[3] Sorbonne Univ, Coll Doctoral, F-75005 Paris, France
[4] Inst Pasteur, Bioinformat & Biostat Hub C3BI, USR 3756, F-75015 Paris, France
[5] CNRS, F-75015 Paris, France
[6] Inst Pasteur, Cellular Plastic & Dis Modelling Unit, F-75015 Paris, France
[7] CNRS UMR3738, F-75015 Paris, France
[8] Helmholtz Zentrum Munchen, Inst Epigenet & Stem Cells, Munich, Germany
[9] Inst Pasteur, Expt Neuropathol Unit, F-75015 Paris, France
[10] Univ Montpellier, CNRS, Inst Genet Mol Montpellier, Montpellier, France
[11] CRCL, Cellular Reprogramming & Oncogenesis Unit, F-69008 Lyon, France
基金
欧洲研究理事会;
关键词
TRANSCRIPTION FACTORS; GENE-EXPRESSION; SUMOYLATION; REPRESSION; DOMAINS; PATHWAY; ROLES; DUX;
D O I
10.1016/j.stem.2018.10.001
中图分类号
Q813 [细胞工程];
学科分类号
摘要
Understanding general principles that safeguard cellular identity should reveal critical insights into common mechanisms underlying specification of varied cell types. Here, we show that SUMO modification acts to stabilize cell fate in a variety of contexts. Hyposumoylation enhances pluripotency reprogramming in vitro and in vivo, increases lineage transdifferentiation, and facilitates leukemic cell differentiation. Suppressing sumoylation in embryonic stem cells (ESCs) promotes their conversion into 2-cell-embryo-like (2C-like) cells. During reprogramming to pluripotency, SUMO functions on fibroblastic enhancers to retain somatic transcription factors together with Oct4, Sox2, and Klf4, thus impeding somatic enhancer inactivation. In contrast, in ESCs, SUMO functions on heterochromatin to silence the 2C program, maintaining both proper H3K9me3 levels genome-wide and repression of the Dux locus by triggering recruitment of the sumoylated PRC1.6 and Kap/Setdb1 repressive complexes. Together, these studies show that SUMO acts on chromatin as a glue to stabilize key determinants of somatic and pluripotent states.
引用
收藏
页码:742 / +
页数:24
相关论文
共 52 条
[1]   Reprogramming in vivo produces teratomas and iPS cells with totipotency features [J].
Abad, Maria ;
Mosteiro, Lluc ;
Pantoja, Cristina ;
Canamero, Marta ;
Rayon, Teresa ;
Ors, Inmaculada ;
Grana, Osvaldo ;
Megias, Diego ;
Dominguez, Orlando ;
Martinez, Dolores ;
Manzanares, Miguel ;
Ortega, Sagrario ;
Serrano, Manuel .
NATURE, 2013, 502 (7471) :340-+
[2]   Chromatin dynamics during cellular reprogramming [J].
Apostolou, Effie ;
Hochedlinger, Konrad .
NATURE, 2013, 502 (7472) :462-471
[3]   Compositional Control of Phase-Separated Cellular Bodies [J].
Banani, Salman F. ;
Rice, Allyson M. ;
Peeples, William B. ;
Lin, Yuan ;
Jain, Saumya ;
Parker, Roy ;
Rosen, Michael K. .
CELL, 2016, 166 (03) :651-663
[4]   CpG island-mediated global gene regulatory modes in mouse embryonic stem cells [J].
Beck, Samuel ;
Lee, Bum-Kyu ;
Rhee, Catherine ;
Song, Jawon ;
Woo, Andrew J. ;
Kim, Jonghwan .
NATURE COMMUNICATIONS, 2014, 5
[5]   H3K9me3-Dependent Heterochromatin: Barrier to Cell Fate Changes [J].
Becker, Justin S. ;
Nicetto, Dario ;
Zaret, Kenneth S. .
TRENDS IN GENETICS, 2016, 32 (01) :29-41
[6]   A Serial shRNA Screen for Roadblocks to Reprogramming Identifies the Protein Modifier SUMO2 [J].
Borkent, Marti ;
Bennett, Brian D. ;
Lackford, Brad ;
Bar-Nur, Ori ;
Brumbaugh, Justin ;
Wang, Li ;
Du, Ying ;
Fargo, David C. ;
Apostolou, Effie ;
Cheloufi, Sihem ;
Maherali, Nimet ;
Elledge, Stephen J. ;
Hu, Guang ;
Hochedlinger, Konrad .
STEM CELL REPORTS, 2016, 6 (05) :704-716
[7]   A Robust and Highly Efficient Immune Cell Reprogramming System [J].
Bussmann, Lars H. ;
Schubert, Alexis ;
Vu Manh, Thien Phong ;
De Andres, Luisa ;
Desbordes, Sabrina C. ;
Parra, Maribel ;
Zimmermann, Timo ;
Rapino, Francesca ;
Rodriguez-Ubreva, Javier ;
Ballestar, Esteban ;
Graf, Thomas .
CELL STEM CELL, 2009, 5 (05) :554-566
[8]   The histone chaperone CAF-1 safeguards somatic cell identity [J].
Cheloufi, Sihem ;
Elling, Ulrich ;
Hopfgartner, Barbara ;
Jung, Youngsook L. ;
Murn, Jernej ;
Ninova, Maria ;
Hubmann, Maria ;
Badeaux, Aimee I. ;
Ang, Cheen Euong ;
Tenen, Danielle ;
Wesche, Daniel J. ;
Abazova, Nadezhda ;
Hogue, Max ;
Tasdemir, Nilgun ;
Brumbaugh, Justin ;
Rathert, Philipp ;
Jude, Julian ;
Ferrari, Francesco ;
Blanco, Andres ;
Fellner, Michaela ;
Wenzel, Daniel ;
Zinner, Marietta ;
Vidal, Simon E. ;
Bell, Oliver ;
Stadtfeld, Matthias ;
Chang, Howard Y. ;
Almouzni, Genevieve ;
Lowe, Scott W. ;
Rinn, John ;
Wernig, Marius ;
Aravin, Alexei ;
Shi, Yang ;
Park, Peter J. ;
Penninger, Josef M. ;
Zuber, Johannes ;
Hochedlinger, Konrad .
NATURE, 2015, 528 (7581) :218-+
[9]   SUMO: A Multifaceted Modifier of Chromatin Structure and Function [J].
Cubenas-Potts, Caelin ;
Matunis, Michael J. .
DEVELOPMENTAL CELL, 2013, 24 (01) :1-12
[10]   DUX-family transcription factors regulate zygotic genome activation in placental mammals [J].
De Iaco, Alberto ;
Planet, Evarist ;
Coluccio, Andrea ;
Verp, Sonia ;
Duc, Julien ;
Trono, Didier .
NATURE GENETICS, 2017, 49 (06) :941-+