A novel UV laser ChIP-seq method for the study of aberrant transcription factor binding in cancer cells

被引:0
|
作者
Stanko, C. [1 ,2 ]
Bohm, A. -L [1 ,2 ]
Schenk, T. [1 ,2 ]
机构
[1] Univ Klinikum Jena, Klin Innere Med Hamatol & Internist Onkol 2, Jena, Germany
[2] Zentrum Mol Biomed CMB, Inst Mol Zellbiol, Jena, Germany
关键词
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
ep254
引用
收藏
页码:295 / 295
页数:1
相关论文
共 50 条
  • [31] TFEA.ChIP: a tool kit for transcription factor binding site enrichment analysis capitalizing on ChIP-seq datasets
    Puente-Santamaria, Laura
    Wasserman, Wyeth W.
    del Peso, Luis
    BIOINFORMATICS, 2019, 35 (24) : 5339 - 5340
  • [32] PolyaPeak: Detecting Transcription Factor Binding Sites from ChIP-seq Using Peak Shape Information
    Wu, Hao
    Ji, Hongkai
    PLOS ONE, 2014, 9 (03):
  • [33] Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data
    Victor G Levitsky
    Ivan V Kulakovskiy
    Nikita I Ershov
    Dmitry Yu Oshchepkov
    Vsevolod J Makeev
    T C Hodgman
    Tatyana I Merkulova
    BMC Genomics, 15
  • [34] Discovering unknown human and mouse transcription factor binding sites and their characteristics from ChIP-seq data
    Yu, Chun-Ping
    Kuo, Chen-Hao
    Nelson, Chase W.
    Chen, Chi-An
    Soh, Zhi Thong
    Lin, Jinn-Jy
    Hsiao, Ru-Xiu
    Chang, Chih-Yao
    Li, Wen-Hsiung
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 118 (20)
  • [35] An Integrated Pipeline for the Genome-Wide Analysis of Transcription Factor Binding Sites from ChIP-Seq
    Mercier, Eloi
    Droit, Arnaud
    Li, Leping
    Robertson, Gordon
    Zhang, Xuekui
    Gottardo, Raphael
    PLOS ONE, 2011, 6 (02):
  • [36] Studying the evolution of transcription factor binding events using multi-species ChIP-Seq data
    Zheng, Wei
    Zhao, Hongyu
    STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY, 2013, 12 (01) : 1 - 15
  • [37] MotifGenie: a Python']Python application for searching transcription factor binding sequences using ChIP-Seq datasets
    Oguztuzun, Cerag
    Yasar, Pelin
    Yavuz, Kerim
    Muyan, Mesut
    Can, Tolga
    BIOINFORMATICS, 2021, 37 (22) : 4238 - 4239
  • [38] Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data
    Levitsky, Victor G.
    Kulakovskiy, Ivan V.
    Ershov, Nikita I.
    Oshchepkov, Dmitry Yu
    Makeev, Vsevolod J.
    Hodgman, T. C.
    Merkulova, Tatyana I.
    BMC GENOMICS, 2014, 15
  • [39] ChIP-seq and RNA-seq Methods to Study Circadian Control of Transcription in Mammals
    Takahashi, Joseph S.
    Kumar, Vivek
    Nakashe, Prachi
    Koike, Nobuya
    Huang, Hung-Chung
    Green, Carla B.
    Kim, Tae-Kyung
    CIRCADIAN RHYTHMS AND BIOLOGICAL CLOCKS, PT A, 2015, 551 : 285 - 321
  • [40] CISMAPPER: predicting regulatory interactions from transcription factor ChIP-seq data
    O'Connor, Timothy
    Boden, Mikael
    Bailey, Timothy L.
    NUCLEIC ACIDS RESEARCH, 2017, 45 (04) : e19