Whole exome sequencing in 17 consanguineous Iranian pedigrees expands the mutational spectrum of inherited retinal dystrophies

被引:7
作者
Rehman, Atta Ur [1 ,2 ]
Sepahi, Neda [3 ]
Bedoni, Nicola [1 ,2 ]
Ravesh, Zeinab [4 ]
Salmaninejad, Arash [5 ]
Cancellieri, Francesca [6 ,7 ]
Peter, Virginie G. [4 ,6 ,7 ,8 ]
Quinodoz, Mathieu [4 ,6 ,7 ]
Mojarrad, Majid [5 ]
Pasdar, Alireza [5 ,9 ,10 ]
Asad, Ali Ghanbari [3 ]
Ghalamkari, Saman [11 ]
Piran, Mehran [3 ]
Piran, Mehrdad [3 ]
Superti-Furga, Andrea [1 ,2 ]
Rivolta, Carlo [4 ,6 ,7 ]
机构
[1] Lausanne Univ Hosp, Div Genet Med, Lausanne, Switzerland
[2] Univ Lausanne, Lausanne, Switzerland
[3] Fasa Univ Med Sci, Noncommunicable Dis Res Ctr, Fasa, Iran
[4] Univ Leicester, Dept Genet & Genome Biol, Leicester, Leics, England
[5] Mashhad Univ Med Sci, Fac Med, Dept Med Genet & Mol Med, Mashhad, Razavi Khorasan, Iran
[6] Inst Mol & Clin Ophthalmol Basel IOB, Basel, Switzerland
[7] Univ Basel, Dept Ophthalmol, Basel, Switzerland
[8] Univ Lausanne, Lausanne Univ Hosp, Inst Expt Pathol, Lausanne, Switzerland
[9] Mashhad Univ Med Sci, Fac Med, Med Genet Res Ctr, Mashhad, Razavi Khorasan, Iran
[10] Univ Aberdeen, Med Sch, Div Appl Med, Aberdeen, Scotland
[11] Persian Bayangene Res & Training Inst, Shiraz, Iran
基金
瑞士国家科学基金会;
关键词
GENETIC-ANALYSIS; RETINITIS-PIGMENTOSA; RDH12; MUTATIONS; IDENTIFICATION; DEGENERATION; DISEASE; COHORT; PREDICTION; DIAGNOSIS; FAMILIES;
D O I
10.1038/s41598-021-98677-3
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Inherited retinal dystrophies (IRDs) constitute one of the most heterogeneous groups of Mendelian human disorders. Using autozygome-guided next-generation sequencing methods in 17 consanguineous pedigrees of Iranian descent with isolated or syndromic IRD, we identified 17 distinct genomic variants in 11 previously-reported disease genes. Consistent with a recessive inheritance pattern, as suggested by pedigrees, variants discovered in our study were exclusively bi-allelic and mostly in a homozygous state (in 15 families out of 17, or 88%). Out of the 17 variants identified, 5 (29%) were never reported before. Interestingly, two mutations (GUCY2D:c.564dup, p.Ala189ArgfsTer130 and TULP1:c.1199G > A, p.Arg400Gln) were also identified in four separate pedigrees (two pedigrees each). In addition to expanding the mutational spectrum of IRDs, our findings confirm that the traditional practice of endogamy in the Iranian population is a prime cause for the appearance of IRDs.
引用
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页数:9
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