Dahlia mosaic virus (DMV), an aphid-transmitted caulimovirus in the family Caulimoviridae, is an important pathogen of dahlia (Dahlia variabilis). Development of rapid, and sensitive diagnostic tools is essential in surveillance and management of DMV. A loop-mediated isothermal amplification (LAMP) assay was developed for DMV detection. The LAMP assay targets the reverse transcriptase region of the DMV genome and is optimal at a temperature of 60 degrees C and run time of 60 min, and amplification was detected through fluorescence detection and by agarose gel electrophoresis. The assay detected DMV in DNA concentration as low as 10(-3) ng. To the best of our knowledge, this is the first report of a LAMP assay for the detection of DMV, a plant DNA virus. This assay will be useful in rapid and sensitive detection of DMV and in reducing the virus incidence through production of virus-free planting material.
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, EnglandBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Haas, Brian J.
Papanicolaou, Alexie
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Black Mt Labs, Commonwealth Sci & Ind Res Org CSIRO Ecosyst, Canberra, ACT, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Papanicolaou, Alexie
Yassour, Moran
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Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Hebrew Univ Jerusalem, Selim & Rachel Benin Sch Comp Sci, Jerusalem, IsraelBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Yassour, Moran
Grabherr, Manfred
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Uppsala Univ, Dept Med Biochem & Microbiol, Sci Life Lab, Uppsala, SwedenBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Grabherr, Manfred
Blood, Philip D.
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Carnegie Mellon Univ, Pittsburgh Supercomp Ctr, Pittsburgh, PA 15213 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Blood, Philip D.
Bowden, Joshua
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CSIRO Informat Management & Technol, St Lucia, Qld, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Bowden, Joshua
Couger, Matthew Brian
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Oklahoma State Univ, Dept Microbiol & Mol Genet, Stillwater, OK 74078 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Couger, Matthew Brian
Eccles, David
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h-index: 0
机构:
Griffith Univ, Genom Res Ctr, Gold Coast, Qld, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Eccles, David
Li, Bo
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Univ Wisconsin, Dept Comp Sci, Madison, WI 53706 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Li, Bo
Lieber, Matthias
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Tech Univ Dresden, Ctr Informat Serv & High Performance Comp ZII I, D-01062 Dresden, GermanyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Lieber, Matthias
MacManes, Matthew D.
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h-index: 0
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Univ Calif Berkeley, Calif Inst Quantitat Biosci, Berkeley, CA 94720 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
MacManes, Matthew D.
Ott, Michael
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h-index: 0
机构:
Black Mt Labs, Commonwealth Sci & Ind Res Org CSIRO Ecosyst, Canberra, ACT, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Ott, Michael
Orvis, Joshua
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h-index: 0
机构:
Inst Genome Sci, Baltimore, MD USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Orvis, Joshua
Pochet, Nathalie
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机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Univ Ghent VIB, Dept Plant Biotechnol & Bioinformat, Dept Plant Syst Biol, Ghent, BelgiumBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Pochet, Nathalie
Strozzi, Francesco
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h-index: 0
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Localita Cascina Codazza, Lodi, ItalyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Strozzi, Francesco
Weeks, Nathan
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h-index: 0
机构:
USDA ARS, Corn Insects & Crop Genet Res Unit, Ames, IA USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Weeks, Nathan
Westerman, Rick
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h-index: 0
机构:
Purdue Univ, Genom Facil, W Lafayette, IN 47907 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Westerman, Rick
William, Thomas
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GWT TUD GmbH, Saxony, GermanyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
William, Thomas
Dewey, Colin N.
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Univ Wisconsin, Dept Biostat & Med Informat, Madison, WI USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Dewey, Colin N.
Henschel, Robert
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机构:
Indiana Univ, Res Technol Div, Univ Informat Technol Serv, Bloomington, IN USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Henschel, Robert
Leduc, Richard D.
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机构:
Indiana Univ, Res Technol Div, Univ Informat Technol Serv, Bloomington, IN USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Leduc, Richard D.
Friedman, Nir
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h-index: 0
机构:Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Friedman, Nir
Regev, Aviv
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h-index: 0
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
MIT, Howard Hughes Med Inst, Dept Biol, Cambridge, MA USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Hily, Jean-Michel
Candresse, Thierry
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h-index: 0
机构:
Univ Bordeaux, INRA, UMR Biol Fruit & Pathol 1332, Bordeaux, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Candresse, Thierry
Garcia, Shahinez
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h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Garcia, Shahinez
Vigne, Emmanuelle
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Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Vigne, Emmanuelle
Tanniere, Melanie
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h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
USDA ARS, European Biol Control Lab, Campus Int Baillarguet Montferrier Sur Lez, St Gely Du Fesc, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Tanniere, Melanie
Komar, Veronique
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Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Komar, Veronique
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Barnabe, Guillaume
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Alliaume, Antoine
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Gilg, Sophie
Hommay, Gerard
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h-index: 0
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Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Hommay, Gerard
Beuve, Monique
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Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Beuve, Monique
Marais, Armelle
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机构:
Univ Bordeaux, INRA, UMR Biol Fruit & Pathol 1332, Bordeaux, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Marais, Armelle
Lemaire, Olivier
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h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, EnglandBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Haas, Brian J.
Papanicolaou, Alexie
论文数: 0引用数: 0
h-index: 0
机构:
Black Mt Labs, Commonwealth Sci & Ind Res Org CSIRO Ecosyst, Canberra, ACT, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Papanicolaou, Alexie
Yassour, Moran
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Hebrew Univ Jerusalem, Selim & Rachel Benin Sch Comp Sci, Jerusalem, IsraelBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Yassour, Moran
Grabherr, Manfred
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Med Biochem & Microbiol, Sci Life Lab, Uppsala, SwedenBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Grabherr, Manfred
Blood, Philip D.
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h-index: 0
机构:
Carnegie Mellon Univ, Pittsburgh Supercomp Ctr, Pittsburgh, PA 15213 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Blood, Philip D.
Bowden, Joshua
论文数: 0引用数: 0
h-index: 0
机构:
CSIRO Informat Management & Technol, St Lucia, Qld, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Bowden, Joshua
Couger, Matthew Brian
论文数: 0引用数: 0
h-index: 0
机构:
Oklahoma State Univ, Dept Microbiol & Mol Genet, Stillwater, OK 74078 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Couger, Matthew Brian
Eccles, David
论文数: 0引用数: 0
h-index: 0
机构:
Griffith Univ, Genom Res Ctr, Gold Coast, Qld, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Eccles, David
Li, Bo
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Comp Sci, Madison, WI 53706 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Li, Bo
Lieber, Matthias
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Dresden, Ctr Informat Serv & High Performance Comp ZII I, D-01062 Dresden, GermanyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Lieber, Matthias
MacManes, Matthew D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Calif Inst Quantitat Biosci, Berkeley, CA 94720 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
MacManes, Matthew D.
Ott, Michael
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h-index: 0
机构:
Black Mt Labs, Commonwealth Sci & Ind Res Org CSIRO Ecosyst, Canberra, ACT, AustraliaBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Ott, Michael
Orvis, Joshua
论文数: 0引用数: 0
h-index: 0
机构:
Inst Genome Sci, Baltimore, MD USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Orvis, Joshua
Pochet, Nathalie
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Univ Ghent VIB, Dept Plant Biotechnol & Bioinformat, Dept Plant Syst Biol, Ghent, BelgiumBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Pochet, Nathalie
Strozzi, Francesco
论文数: 0引用数: 0
h-index: 0
机构:
Localita Cascina Codazza, Lodi, ItalyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Strozzi, Francesco
Weeks, Nathan
论文数: 0引用数: 0
h-index: 0
机构:
USDA ARS, Corn Insects & Crop Genet Res Unit, Ames, IA USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Weeks, Nathan
Westerman, Rick
论文数: 0引用数: 0
h-index: 0
机构:
Purdue Univ, Genom Facil, W Lafayette, IN 47907 USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Westerman, Rick
William, Thomas
论文数: 0引用数: 0
h-index: 0
机构:
GWT TUD GmbH, Saxony, GermanyBroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
William, Thomas
Dewey, Colin N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Biostat & Med Informat, Madison, WI USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Dewey, Colin N.
Henschel, Robert
论文数: 0引用数: 0
h-index: 0
机构:
Indiana Univ, Res Technol Div, Univ Informat Technol Serv, Bloomington, IN USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Henschel, Robert
Leduc, Richard D.
论文数: 0引用数: 0
h-index: 0
机构:
Indiana Univ, Res Technol Div, Univ Informat Technol Serv, Bloomington, IN USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Leduc, Richard D.
Friedman, Nir
论文数: 0引用数: 0
h-index: 0
机构:Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
Friedman, Nir
Regev, Aviv
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
MIT, Howard Hughes Med Inst, Dept Biol, Cambridge, MA USABroad Inst Massachusetts Inst Technol MIT & Harva, Cambridge, England
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Hily, Jean-Michel
Candresse, Thierry
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bordeaux, INRA, UMR Biol Fruit & Pathol 1332, Bordeaux, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Candresse, Thierry
Garcia, Shahinez
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Garcia, Shahinez
Vigne, Emmanuelle
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Vigne, Emmanuelle
Tanniere, Melanie
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
USDA ARS, European Biol Control Lab, Campus Int Baillarguet Montferrier Sur Lez, St Gely Du Fesc, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Tanniere, Melanie
Komar, Veronique
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Komar, Veronique
论文数: 引用数:
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机构:
Barnabe, Guillaume
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机构:
Alliaume, Antoine
论文数: 引用数:
h-index:
机构:
Gilg, Sophie
Hommay, Gerard
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Hommay, Gerard
Beuve, Monique
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Beuve, Monique
Marais, Armelle
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bordeaux, INRA, UMR Biol Fruit & Pathol 1332, Bordeaux, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France
Marais, Armelle
Lemaire, Olivier
论文数: 0引用数: 0
h-index: 0
机构:
Univ Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, FranceUniv Strasbourg, INRA, UMR Sante Vigne & Qualite Vin 1131, Colmar, France