Comprehensive analysis ofSWEETfamily genes inEucalyptus(Eucalyptus grandis)

被引:7
作者
Yin, Qi [1 ]
Zhu, Li [1 ]
Du, Pingzhou [1 ]
Fan, Chunjie [2 ]
Wang, Jinyan [3 ]
Zhang, Baolong [3 ]
Li, Huiling [1 ]
机构
[1] South China Agr Univ, State Key Lab Conservat & Utilizat Subtrop Agrobi, Guangdong Key Lab Innovat Dev & Utilizat Forest P, Coll Forestry & Landscape Architecture, Guangzhou 510642, Guangdong, Peoples R China
[2] Chinese Acad Forestry, Res Inst Trop Forestry, Guangzhou, Guangdong, Peoples R China
[3] Jiangsu Acad Agr Sci, Prov Key Lab Agrobiol, Nanjing, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
SWEET family genes; bioinformatics; Eucalyptus; expression pattern; GENOME-WIDE IDENTIFICATION; SUGAR TRANSPORTERS; EXPRESSION ANALYSIS; FAMILY; SUCROSE; PHLOEM; EVOLUTION; TOLERANCE; HOMOLOGS; SWEET17;
D O I
10.1080/13102818.2020.1790417
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
SWEET family genes play an important role in different physiological processes, including sugar transport and adjustments, plant development and environmental adaptability. BLAST tools and Hidden Markov Model-directed sequence alignments inEucalyptus grandisgenome identified 52EucalyptusSWEET genes containing MtN3/saliva domain. Out of these, 40 genes encode predicted proteins that have 6 or more transmembrane regions with two MtN3/saliva domains. Six predicted proteins contained only one MtN3/saliva domain, similar to the structure of microbial SemiSWEETs. Of the 52 SWEET candidates, only 45 SWEET family genes were mapped on 8 chromosomes, and most of them showed clustered distribution. The expression profiles revealed that the SWEET genes have different expression in different tissues, showing that they might play different functions inEucalyptus. Our results explored the evolutionary aspects, provided a systematic description ofEucalyptusSWEET genes and can help researchers to understand the functions of the SWEET family genes inEucalyptus.
引用
收藏
页码:595 / 604
页数:10
相关论文
共 50 条
  • [21] Botryosphaeria dothidea endophytic in Eucalyptus grandis and Eucalyptus nitens in South Africa
    Smith, H
    Wingfield, MJ
    Petrini, O
    FOREST ECOLOGY AND MANAGEMENT, 1996, 89 (1-3) : 189 - 195
  • [22] Transcriptome analysis identifies genes involved in the somatic embryogenesis of Eucalyptus
    Xiao, Yufei
    Li, Junji
    Zhang, Ye
    Zhang, Xiaoning
    Liu, Hailong
    Qin, Zihai
    Chen, Bowen
    BMC GENOMICS, 2020, 21 (01)
  • [23] Studies of Eucalyptus Grandis Lignin. Part I: Estimation of Lignin and Polyphenols Content in Eucalyptus grandis by Infrared Spectroscopy
    Morais, Sergio A. L.
    Nascimento, Evandro A.
    Pilo-Veloso, Dorila
    JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY, 1991, 2 (03) : 129 - 132
  • [24] Genome-wide analysis and identification of the TBL gene family in Eucalyptus grandis
    Tang, Jiye
    Ling, Tenghong
    Li, Huiling
    Fan, Chunjie
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [25] Construction and analysis of a SSH cDNA library of Eucalyptus grandis x Eucalyptus urophylla 9224 induced by Cylindrocladium quinqueseptatum
    Feng, Li-Zhen
    Guo, Wen-Shuo
    Xie, Wan-Feng
    Chen, Quan-Zhu
    Ye, Xiao-Zhen
    BOTANY-BOTANIQUE, 2012, 90 (12): : 1277 - 1283
  • [26] INFLUENCE OF ECTOMYCORRHIZAE ON THE GROWTH OF SEEDLINGS OF Eucalyptus grandis, Corymbia citriodora, Eucalyptus saligna AND Eucalyptus dunnii
    Weirich, Sidinei Wolnei
    da Silva, Rodrigo Ferreira
    Perrando, Edison Rogerio
    da Ros, Clovis Orlando
    Dellai, Alex
    Scheid, Douglas Leandro
    Trombeta, Helena Wichineski
    CIENCIA FLORESTAL, 2018, 28 (02): : 765 - 775
  • [27] Polyploidy induction of clone of Eucalyptus grandis with colchicine
    Han, C.
    Xu, J. M.
    Du, Z. H.
    Li, G. Y.
    Zeng, B. S.
    Wu, S. J.
    Wang, W.
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (66): : 14711 - 14717
  • [28] Transcriptional reprogramming during recovery from drought stress in Eucalyptus grandis
    Teshome, Demissew Tesfaye
    Zharare, Godfrey Elijah
    Ployet, Raphael
    Naidoo, Sanushka
    TREE PHYSIOLOGY, 2023, 43 (06) : 979 - 994
  • [29] Heat Treatment and Color of Eucalyptus grandis Wood
    Vinha Zanuncio, Antonio Jose
    Farias, Elias de Sa
    da Silveira, Teodorico Alves
    FLORESTA E AMBIENTE, 2014, 21 (01): : 85 - 90
  • [30] EFFECT OF THE STEAMING ON THE DRYING OF Eucalyptus grandis BOARDS
    Rezende, Raphael Nogueira
    Lima, Jose Tarcisio
    de Ramos e Paula, Luana Elis
    Moreira da Silva, Jose Reinaldo
    CERNE, 2015, 21 (01) : 37 - 43