Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H

被引:1
作者
Becker, Katja [1 ]
Meyer, Andreas [1 ,2 ]
Roberts, Tania Michelle [1 ]
Panke, Sven [1 ]
机构
[1] Swiss Fed Inst Technol, Dept Biosyst Sci & Engn, CH-4058 Basel, Switzerland
[2] FGen GmbH, CH-4057 Basel, Switzerland
关键词
DNA-REPLICATION; HOMOLOGOUS RECOMBINATION; EXPRESSION SYSTEM; PURIFIED PROTEINS; IN-VIVO; R-LOOPS; BACTERIOPHAGE-T7; POLYMERASE; INITIATION; TRANSCRIPTION;
D O I
10.1093/nar/gkab596
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
T7 RNA polymerase (RNAP) is a valuable tool in biotechnology, basic research and synthetic biology due to its robust, efficient and selective transcription of genes. Here, we expand the scope of T7 RNAP to include plasmid replication. We present a novel type of plasmid, termed T7 on plasmids that replicate, in an engineered Escherichia coli, with a T7 phage origin as the sole origin of replication. We find that while the T7 replication proteins; T7 DNA polymerase, T7 single-stranded binding proteins and T7 helicase-primase are dispensable for replication, T7 RNAP is required, although dependent on a T7 RNAP variant with reduced activity. We also find that T7 RNAP-dependent replication of T7 on plasmids requires the inactivation of cellular ribonuclease H. We show that the system is portable among different plasmid architectures and ribonuclease H-inactivated E. coli strains. Finally, we find that the copy number of T7 ori plasmids can be tuned based on the induction level of RNAP. Altogether, this study assists in the choice of an optimal genetic tool by providing a novel plasmid that requires T7 RNAP for replication.
引用
收藏
页码:8189 / 8198
页数:10
相关论文
共 50 条
  • [31] Single-pass transcription by T7 RNA polymerase
    Passalacqua, Luiz F. M.
    Dingilian, Armine, I
    Luptak, Andrej
    RNA, 2020, 26 (12) : 2062 - 2071
  • [32] Transcription reinitiation properties of bacteriophage T7 RNA polymerase
    Ferrari, R
    Rivetti, C
    Dieci, G
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 315 (02) : 376 - 380
  • [33] Functional architecture of T7 RNA polymerase transcription complexes
    Nayak, Dhananjaya
    Guo, Qing
    Sousa, Rui
    JOURNAL OF MOLECULAR BIOLOGY, 2007, 371 (02) : 490 - 500
  • [34] Maximizing transcription of nucleic acids with efficient T7 promoters
    Conrad, Thomas
    Plumbom, Izabela
    Alcobendas, Maria
    Vidal, Ramon
    Sauer, Sascha
    COMMUNICATIONS BIOLOGY, 2020, 3 (01)
  • [35] ABORTIVE TRANSCRIPTION OF THE T7 PROMOTER INDUCED BY ELSAMICIN-A
    PORTUGAL, J
    ANTI-CANCER DRUG DESIGN, 1995, 10 (05): : 427 - 438
  • [36] T7 RNA polymerase elongation complex structure and movement
    Huang, JB
    Sousa, R
    JOURNAL OF MOLECULAR BIOLOGY, 2000, 303 (03) : 347 - 358
  • [37] ERROR-PRONE REPLICATION OF REPEATED DNA-SEQUENCES BY T7 DNA-POLYMERASE IN THE ABSENCE OF ITS PROCESSIVITY SUBUNIT
    KUNKEL, TA
    PATEL, SS
    JOHNSON, KA
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (15) : 6830 - 6834
  • [38] Protein Interactions in the T7 DNA Replisome Facilitate DNA Damage Bypass
    Zou, Zhenyu
    Chen, Ze
    Xue, Qizhen
    Xu, Ying
    Xiong, Jingyuan
    Yang, Ping
    Le, Shuai
    Zhang, Huidong
    CHEMBIOCHEM, 2018, 19 (16) : 1740 - 1749
  • [39] Chimeric DNA byproducts in strand displacement amplification using the T7 replisome
    Nye, Dillon B.
    Tanner, Nathan A.
    PLOS ONE, 2022, 17 (09):
  • [40] Comprehensive evaluation of T7 promoter for enhanced yield and quality in mRNA production
    Sari, Yustika
    Rosa, Sara Sousa
    Jeffries, Jack
    Marques, Marco P. C.
    SCIENTIFIC REPORTS, 2024, 14 (01):