Hydrogen peroxide and hypochlorous acid influx through the major S. Typhimurium porin OmpD is affected by substitution of key residues of the channel

被引:15
作者
Aguayo, Daniel [2 ,4 ]
Pacheco, Nicolas [1 ]
Morales, Eduardo H. [3 ]
Collao, Bernardo [1 ]
Luraschi, Roberto [1 ]
Cabezas, Carolina [1 ]
Calderon, Paulina [1 ]
Gonzalez-Nilo, Fernando [2 ,4 ]
Gil, Fernando [1 ]
Calderon, Ivan L. [1 ]
Saavedra, Claudia P. [1 ]
机构
[1] Univ Andres Bello, Fac Ciencias Biol, Dept Ciencias Biol, Lab Microbiol Mol, Santiago, Chile
[2] Univ Andres Bello, Fac Ciencias Biol, Ctr Bioinformat & Integrat Biol, Santiago, Chile
[3] Univ Santiago Chile, Fac Quim & Biol, Dept Biol, Lab Microbiol Mol, Santiago, Chile
[4] Univ Valparaiso, Fac Ciencias, Ctr Interdisciplinario Neurociencia Valparaiso, Valparaiso 2366103, Chile
关键词
OmpD porin; Hydrogen peroxide; Hypochlorous acid; Homology modeling; Molecular simulations; MOLECULAR-DYNAMICS SIMULATION; ESCHERICHIA-COLI; SALMONELLA-ENTERICA; MEMBRANE-PROTEIN; GENE; PERMEABILITY; SELECTIVITY; SYSTEMS; EFFLUX; REGION;
D O I
10.1016/j.abb.2015.01.005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
OmpD is the major Salmonella enterica serovar Typhimurium (S. Typhimurium) porin and mediates hydrogen peroxide (H2O2) influx. The results described herein extend this finding to hypochlorous acid (HOCI), another reactive oxygen species that is also part of the oxidative burst generated by the phagosome. S. Typhimurium cells lacking OmpD show decreased HOCI influx, and OmpD-reconstituted proteoliposomes show an increase in the uptake of the toxic compound. To understand this physiologically relevant process, we investigated the role of key OmpD residues in H2O2 and NaOCl transport. Using a theoretical approach, residue K16 was defined as a major contributor to the channel electrostatic properties, and E1 II was shown to directly participate in the size-exclusion limit of the channel. Together, we provide theoretical, genetic, and biochemical evidence that OmpD mediates H2O2 and NaOCl uptake, and that key residues of the channel are implicated in this process. (C) 2015 Elsevier Inc. All rights reserved.
引用
收藏
页码:38 / 45
页数:8
相关论文
共 56 条
[21]   BACTERIAL ADAPTATION TO OXIDATIVE STRESS - IMPLICATIONS FOR PATHOGENESIS AND INTERACTION WITH PHAGOCYTIC-CELLS [J].
HASSETT, DJ ;
COHEN, MS .
FASEB JOURNAL, 1989, 3 (14) :2574-2582
[22]   Dihydrofluorescein diacetate is superior for detecting intracellular oxidants:: Comparison with 2′,7′-dichlorodihydrofluorescein diacetate, 5(and 6)-carboxy-2′,7′-dichlorodihydrofluorescein diacetate, and dihydrorhodamine 123 [J].
Hempel, SL ;
Buettner, GR ;
O'Malley, YQ ;
Wessels, DA ;
Flaherty, DM .
FREE RADICAL BIOLOGY AND MEDICINE, 1999, 27 (1-2) :146-159
[23]   CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data [J].
Huang, Jing ;
MacKerell, Alexander D., Jr. .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2013, 34 (25) :2135-2145
[24]   VMD: Visual molecular dynamics [J].
Humphrey, W ;
Dalke, A ;
Schulten, K .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1996, 14 (01) :33-38
[25]   Ions and counterions in a biological channel:: A molecular dynamics simulation of OmpF porin from Escherichia coli in an explicit membrane with 1 M KCl aqueous salt solution [J].
Im, W ;
Roux, B .
JOURNAL OF MOLECULAR BIOLOGY, 2002, 319 (05) :1177-1197
[26]   Cellular defenses against superoxide and hydrogen peroxide [J].
Imlay, James A. .
ANNUAL REVIEW OF BIOCHEMISTRY, 2008, 77 :755-776
[27]   Participation of the Salmonella OmpD Porin in the Infection of RAW264.7 Macrophages and BALB/c Mice [J].
Ipinza, Francisco ;
Collao, Bernardo ;
Monsalva, Debbie ;
Bustamante, Victor H. ;
Luraschi, Roberto ;
Alegria-Arcos, Melissa ;
Almonacid, Daniel E. ;
Aguayo, Daniel ;
Calderon, Ivan L. ;
Gil, Fernando ;
Santiviago, Carlos A. ;
Morales, Eduardo H. ;
Calva, Edmundo ;
Saavedra, Claudia P. .
PLOS ONE, 2014, 9 (10)
[28]   STRUCTURAL AND FUNCTIONAL ALTERATIONS OF A COLICIN-RESISTANT MUTANT OF OMPF PORIN FROM ESCHERICHIA-COLI [J].
JEANTEUR, D ;
SCHIRMER, T ;
FOUREL, D ;
SIMONET, V ;
RUMMEL, G ;
WIDMER, C ;
ROSENBUSCH, JP ;
PATTUS, F ;
PAGES, JM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (22) :10675-10679
[29]   COMPARISON OF SIMPLE POTENTIAL FUNCTIONS FOR SIMULATING LIQUID WATER [J].
JORGENSEN, WL ;
CHANDRASEKHAR, J ;
MADURA, JD ;
IMPEY, RW ;
KLEIN, ML .
JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (02) :926-935
[30]   Altered Antibiotic Transport in OmpC Mutants Isolated from a Series of Clinical Strains of Multi-Drug Resistant E. coli [J].
Lou, Hubing ;
Chen, Min ;
Black, Susan S. ;
Bushell, Simon R. ;
Ceccarelli, Matteo ;
Mach, Tivadar ;
Beis, Konstantinos ;
Low, Alison S. ;
Bamford, Victoria A. ;
Booth, Ian R. ;
Bayley, Hagan ;
Naismith, James H. .
PLOS ONE, 2011, 6 (10)