Bendix: intuitive helix geometry analysis and abstraction

被引：104

作者：

Dahl, Anna Caroline E. ^{[1
]}

Chavent, Matthieu ^{[1
]}

Sansom, Mark S. P. ^{[1
]}

机构：

[1] Univ Oxford, Dept Biochem, Oxford OX1 3QU, England

来源：

BIOINFORMATICS | 2012年 / 28卷 / 16期

基金：

英国惠康基金; 英国工程与自然科学研究理事会;

关键词：

MOLECULAR-DYNAMICS; PROTEINS;

D O I：

10.1093/bioinformatics/bts357

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The flexibility of alpha-helices is important for membrane protein function and calls for better visualization and analysis. Software is presented that quantifies and projects the helix axis evolution over time, with the choice of uniform or analytic heatmap graphics according to the local geometry. Bendix supports static, molecular dynamics, atomistic and coarse-grained input.

引用

页码：2193 / 2194

页数：2

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