Description of Gibbsiella quercinecans gen. nov., sp. nov., associated with Acute Oak Decline

被引:66
作者
Brady, Carrie [2 ]
Denman, Sandra [1 ]
Kirk, Susan [1 ]
Venter, Stephanus [2 ]
Rodriguez-Palenzuela, Pablo [3 ]
Coutinho, Teresa [2 ]
机构
[1] Ctr Forestry & Climate Change, Farnham GU10 4LH, Surrey, England
[2] Univ Pretoria, Dept Microbiol & Plant Pathol, FABI, ZA-0002 Pretoria, South Africa
[3] Ctr Biotecnol & Genom Plantas UPM INIA, Madrid 28223, Spain
关键词
Acute Oak Decline; Gibbsiella; Enterobacteriaceae; Quercus robur; Q; petraea; Stem bleeding; SEQUENCE-ANALYSIS; DEOXYRIBONUCLEIC-ACID; BRENNERIA-QUERCINA; SPECIES DEFINITION; DNA; HYBRIDIZATION; ENVIRONMENT; PHYLOGENY; STRAINS; MODEL;
D O I
10.1016/j.syapm.2010.08.006
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Gram-negative, facultatively anaerobic bacterial strains were consistently isolated from oak trees displaying symptoms of extensive stem bleeding. In Britain, this disorder is called Acute Oak Decline (ADD). A similar condition has been noted on species of Mediterranean oak in Spain. The identity of bacterial isolates from symptomatic trees in both countries was investigated using molecular techniques and phenotypic assays. 16S rRNA gene sequencing indicated that the strains were most closely related to the genera Serratia, Kluyvera, Klebsiella and Raoultella (all > 97%). Phylogenetic analysis revealed that the strains formed a distinct lineage within the family Enterobacteriaceae, which was confirmed by both gyrB- and rpoB-gene sequencing. DNA-DNA hybridization confirmed that the strains belonged to a single taxon which could also be differentiated phenotypically from its closest phylogenetic neighbours. The phylogenetic and phenotypic data both demonstrated that the strains isolated from oak represented a novel genus and species within the family Enterobacteriaceae for which the name Gibbsiella quercinecans gen. nov., sp. nov. (type strain=FRB 97(T)=LMG 25500(T)=NCPPB 4470(T)) is proposed. Crown Copyright (C) 2010 Published by Elsevier GmbH. All rights reserved.
引用
收藏
页码:444 / 450
页数:7
相关论文
共 31 条
  • [1] [Anonymous], 2009, INT J SYST EVOL MICR
  • [2] Isolation and characterization of Brenneria quercina, causal agent for bark canker and drippy nut of Quercus spp. in Spain
    Biosca, EG
    González, R
    López-López, MJ
    Soria, S
    Montón, C
    Pérez-Laorga, E
    López, MM
    [J]. PHYTOPATHOLOGY, 2003, 93 (04) : 485 - 492
  • [3] Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA)
    Brady, Carrie
    Cleenwerck, Ilse
    Venter, Stephanus
    Vancanneyt, Marc
    Swings, Jean
    Coutinho, Teresa
    [J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 2008, 31 (6-8) : 447 - 460
  • [4] Relationships between soil factors, Quercus robur health, Collybia fusipes root infection and Phytophthora presence
    Camy, C
    Delatour, C
    Marçais, B
    [J]. ANNALS OF FOREST SCIENCE, 2003, 60 (05) : 419 - 426
  • [5] Cleenwerck I, 2002, INT J SYST EVOL MICR, V52, P1551, DOI 10.1099/00207713-52-5-1551
  • [6] Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov.
    Coenye, T
    Falsen, E
    Vancanneyt, M
    Hoste, B
    Govan, JRW
    Kersters, K
    Vandamme, P
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 : 405 - 413
  • [7] Evolution of the gyrB gene and the molecular phylogeny of Enterobacteriaceae:: a model molecule for molecular systematic studies
    Dauga, C
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2002, 52 : 531 - 547
  • [8] DAY W. R., 1927, FORESTRY [GT BRITAIN], V1, P108
  • [9] Denman S., 2009, Quarterly Journal of Forestry, V103, P285
  • [10] FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS
    EZAKI, T
    HASHIMOTO, Y
    YABUUCHI, E
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03): : 224 - 229