Gramella marina sp nov., isolated from the sea urchin Strongylocentrotus intermedius

被引:19
作者
Nedashkoyskaya, Olga I. [1 ]
Kim, Seung Bum [2 ]
Bae, Kyung Soak [3 ]
机构
[1] Russian Acad Sci, Far Eastern Branch, Pacific Inst Bioorgan Chem, Vladivostok 690022, Russia
[2] Chungnam Natl Univ, Coll Biosci & Biotechnol, Dept Microbiol, Taejon 305764, South Korea
[3] Korea Inst Biosci & Biotechnol, Biol Resources Ctr, Taejon 305333, South Korea
关键词
DEOXYRIBONUCLEIC-ACID; FLAVOBACTERIACEAE; FAMILY;
D O I
10.1099/ijs.0.013870-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic position of a novel Gram-stain-negative, aerobic, heterotrophic, gliding, yellow-orange-pigmented bacterium, isolated from the sea urchin Strongylocentrotus intermedius and designated strain KMM 6048(T), was established. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that the isolate was a member of the family Flavobacteriaceae affiliated with recognized species of the genus Gramella, forming a distinct lineage within the genus. 16S rRNA gene sequence similarities between strain KMM 6048(T) and the type strains of species of the genus Gramella were 97.4-98.4%. In line with representative members of the genus Gramella, strain KMM 6048(T) was oxidase- and catalase-positive, hydrolysed gelatin and starch, utilized carbohydrates and possessed a DNA G+C content of 40.0 mol%. However, differentiating phenotypic traits and phylogenetic distinctiveness clearly indicated that the strain represented a novel species within the genus Gramella, for which the name Gramella marina sp. nov. is proposed; the type strain is KMM 6048(T) (=KCTC 12366(T)=LMG 25418(T)).
引用
收藏
页码:2799 / 2802
页数:4
相关论文
共 14 条
  • [1] Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
  • [2] Description of Cellulophaga algicola sp nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov.
    Bowman, JP
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 : 1861 - 1868
  • [3] Felsenstein Joseph, 1993, {PHYLIP}: phylogenetic inference package
  • [4] Jukes TH., 1969, MAMMALIAN PROTEIN ME, P21, DOI [DOI 10.1016/B978-1-4832-3211-9.50009-7, DOI 10.1093/BIOINFORMATICS/BTM404, 10.1016/B978-1-4832-3211-9.50009-7]
  • [5] Streptomyces thermocarboxydovorans sp. nov. and Streptomyces thermocarboxydus sp. nov., two moderately thermophilic carboxydotrophic species from soil
    Kim, SB
    Falconer, C
    Williams, E
    Goodfellow, M
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1998, 48 : 59 - 68
  • [6] Gramella portivictoriae sp nov., a novel member of the family Flavobacteriaceae isolated from marine sediment
    Lau, SCK
    Tsoi, MMY
    Li, XC
    Plakhotnikova, I
    Dobretsov, S
    Wong, PK
    Qian, PY
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 : 2497 - 2500
  • [7] PROCEDURE FOR ISOLATION OF DEOXYRIBONUCLEIC ACID FROM MICRO-ORGANISMS
    MARMUR, J
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1961, 3 (02) : 208 - &
  • [8] DETERMINATION OF BASE COMPOSITION OF DEOXYRIBONUCLEIC ACID FROM ITS THERMAL DENATURATION TEMPERATURE
    MARMUR, J
    DOTY, P
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1962, 5 (01) : 109 - &
  • [9] AN INTEGRATED PROCEDURE FOR THE EXTRACTION OF BACTERIAL ISOPRENOID QUINONES AND POLAR LIPIDS
    MINNIKIN, DE
    ODONNELL, AG
    GOODFELLOW, M
    ALDERSON, G
    ATHALYE, M
    SCHAAL, A
    PARLETT, JH
    [J]. JOURNAL OF MICROBIOLOGICAL METHODS, 1984, 2 (05) : 233 - 241
  • [10] NEDASHKOVSKAYA I, 2003, REICHENBACHIA, V53, P81