Coarse-graining polymers with the MARTINI force-field: polystyrene as a benchmark case

被引:211
作者
Rossi, Giulia [1 ]
Monticelli, Luca [2 ,3 ]
Puisto, Sakari R. [4 ]
Vattulainen, Ilpo [1 ,5 ,6 ]
Ala-Nissila, Tapio [1 ,7 ]
机构
[1] Aalto Univ, Sch Sci & Technol, Dept Appl Phys, FI-00076 Aalto Helsinki, Finland
[2] DSIMB, INSERM, UMR S 665, F-75015 Paris, France
[3] Univ Paris 07, UFR Life Sci, Paris, France
[4] Matox Ltd, Oxford OX1 1BP, England
[5] Tampere Univ Technol, Dept Phys, FI-33101 Tampere, Finland
[6] Univ So Denmark, MEMPHYS, Ctr Biomembrane Phys, DK-5230 Odense M, Denmark
[7] Brown Univ, Dept Phys, Providence, RI 02912 USA
基金
芬兰科学院;
关键词
TEMPERATURE-DEPENDENCE; SELF-DIFFUSION; COMPUTER-SIMULATION; MOLECULAR-WEIGHT; MELTS; MODEL; POLYETHYLENE; DYNAMICS; CHAIN; GYRATION;
D O I
10.1039/c0sm00481b
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We hereby introduce a new hybrid thermodynamic-structural approach to the coarse-graining of polymers. The new model is developed within the framework of the MARTINI force-field (Marrink et al., J. Phys. Chem. B, 2007, 111, 7812), which uses mainly thermodynamic properties as targets in the parameterization. We refine the MARTINI procedure by including one additional target property related to the structure of the polymer, namely the radius of gyration. The force-field optimization is mainly based on experimental data. We test our procedure on polystyrene, a standard benchmark for coarse-grained (CG) polymer force-fields. Our model preserves the backbone-ring structure of the molecule, with each monomer represented by four CG beads. Structural properties in the melt are well reproduced, and their scaling with chain length agrees with the available experimental data. The time conversion factor between the CG and the atomistic simulations is nearly constant over a wide temperature range, and the CG force-field shows reasonable transferability between 350 and 600 K. The model is computationally efficient and polymer melts can be simulated over length scales of tens of nanometres and time scales of tens of microseconds. Finally, we tested our model in dilute conditions. The collapse of the polymer chains in a bad solvent and the swelling in a good solvent could be reproduced.
引用
收藏
页码:698 / 708
页数:11
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