Identification of New Genes Contributing to the Extreme Radioresistance of Deinococcus radiodurans Using a Tn5-Based Transposon Mutant Library

被引:28
|
作者
Dulermo, Remi [1 ]
Onodera, Takefumi [1 ]
Coste, Genevieve [1 ]
Passot, Fanny [1 ]
Dutertre, Murielle [1 ]
Porteron, Martine [1 ]
Confalonieri, Fabrice [1 ]
Sommer, Suzanne [1 ]
Pasternak, Cecile [1 ]
机构
[1] Univ Paris Saclay, Univ Paris Sud, Inst Integrat Biol Cell I2BC, CEA,CNRS, Orsay, France
来源
PLOS ONE | 2015年 / 10卷 / 04期
关键词
C-DI-AMP; RADIATION-RESISTANT BACTERIUM; STRAND BREAK REPAIR; FE-S CLUSTER; ESCHERICHIA-COLI; TN5; TRANSPOSASE; IONIZING-RADIATION; PROTEIN-KINASE; CATALASE KATA; DNA-REPAIR;
D O I
10.1371/journal.pone.0124358
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Here, we have developed an extremely efficient in vivo Tn5-based mutagenesis procedure to construct a Deinococcus radiodurans insertion mutant library subsequently screened for sensitivity to genotoxic agents such as. and UV radiations or mitomycin C. The genes inactivated in radiosensitive mutants belong to various functional categories, including DNA repair functions, stress responses, signal transduction, membrane transport, several metabolic pathways, and genes of unknown function. Interestingly, preliminary characterization of previously undescribed radiosensitive mutants suggests the contribution of cyclic di-AMP signaling in the recovery of D. radiodurans cells from genotoxic stresses, probably by modulating several pathways involved in the overall cell response. Our analyses also point out a new transcriptional regulator belonging to the GntR family, encoded by DR0265, and a predicted RNase belonging to the newly described Y family, both contributing to the extreme radioresistance of D. radiodurans. Altogether, this work has revealed new cell responses involved either directly or indirectly in repair of various cell damage and confirmed that D. radiodurans extreme radiation resistance is determined by a multiplicity of pathways acting as a complex network.
引用
收藏
页数:26
相关论文
共 15 条
  • [1] Identification of differentially regulated Francisella tularensis genes by use of a newly developed Tn5-based transposon delivery system
    Buchan, Blake W.
    McLendon, Molly K.
    Jones, Bradley D.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (09) : 2637 - 2645
  • [2] Identification of novel biofilm genes in avian pathogenic Escherichia coli by Tn5 transposon mutant library
    Hu, Jiangang
    Gu, Yi
    Lu, Huiqi
    Raheem, Muhammad Akmal
    Yu, Fangheng
    Niu, Xiangpeng
    Zuo, Jiakun
    Yin, Huifang
    Huang, Cuiqin
    Song, Xiangjun
    Tu, Jian
    Zhou, Wen
    Jiang, Wei
    Chen, Zhaoguo
    Han, Xiangan
    Qi, Kezong
    WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2022, 38 (08):
  • [3] Identification of novel biofilm genes in avian pathogenic Escherichia coli by Tn5 transposon mutant library
    Jiangang Hu
    Yi Gu
    Huiqi Lu
    Muhammad Akmal Raheem
    Fangheng Yu
    Xiangpeng Niu
    Jiakun Zuo
    Huifang Yin
    Cuiqin Huang
    Xiangjun Song
    Jian Tu
    Wen Zhou
    Wei Jiang
    Zhaoguo Chen
    Xiangan Han
    Kezong Qi
    World Journal of Microbiology and Biotechnology, 2022, 38
  • [4] Identification of seven novel virulence genes from Xanthomonas citri subsp citri by Tn5-based random mutagenesis
    Song, Xue
    Guo, Jing
    Ma, Wen-xiu
    Ji, Zhi-yuan
    Zou, Li-fang
    Chen, Gong-you
    Zou, Hua-song
    JOURNAL OF MICROBIOLOGY, 2015, 53 (05) : 330 - 336
  • [5] Identification of seven novel virulence genes from Xanthomonas citri subsp. citri by Tn5-based random mutagenesis
    Xue Song
    Jing Guo
    Wen-xiu Ma
    Zhi-yuan Ji
    Li-fang Zou
    Gong-you Chen
    Hua-song Zou
    Journal of Microbiology, 2015, 53 : 330 - 336
  • [6] Identification of genes involved in swarming motility using a Pseudomonas aeruginosa PAO1 mini-Tn5-lux mutant library
    Overhage, Joerg
    Lewenza, Shawn
    Marr, Alexandra K.
    Hancock, Robert E. W.
    JOURNAL OF BACTERIOLOGY, 2007, 189 (05) : 2164 - 2169
  • [7] Identification of genes involved in biofilm formation using an EZ-Tn5 mutant library of Xanthomonas citri ssp citri strain 306
    Li, J.
    Wang, N.
    PHYTOPATHOLOGY, 2011, 101 (06) : S101 - S102
  • [8] Identification of genes required for the survival of B. fragilis using massive parallel sequencing of a saturated transposon mutant library
    Yaligara Veeranagouda
    Fasahath Husain
    Elizabeth L Tenorio
    Hannah M Wexler
    BMC Genomics, 15
  • [9] Identification of genes required for the survival of B. fragilis using massive parallel sequencing of a saturated transposon mutant library
    Veeranagouda, Yaligara
    Husain, Fasahath
    Tenorio, Elizabeth L.
    Wexler, Hannah M.
    BMC GENOMICS, 2014, 15
  • [10] New genes of Xanthomonas citri subsp citri involved in pathogenesis and adaptation revealed by a transposon-based mutant library
    Laia, Marcelo L.
    Moreira, Leandro M.
    Dezajacomo, Juliana
    Brigati, Joice B.
    Ferreira, Cristiano B.
    Ferro, Maria I. T.
    Silva, Ana C. R.
    Ferro, Jesus A.
    Oliveira, Julio C. F.
    BMC MICROBIOLOGY, 2009, 9