CARHTAGene:: multipopulation integrated genetic and radiation hybrid mapping

被引：308

作者：

de Givry, S ^{[1
]}

Bouchez, M ^{[1
]}

Chabrier, P ^{[1
]}

Milan, D ^{[1
]}

Schiex, T ^{[1
]}

机构：

[1] INRA, F-31326 Castanet Tolosan, France

来源：

BIOINFORMATICS | 2005年 / 21卷 / 08期

关键词：

D O I：

10.1093/bioinformatics/bti222

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Car(h)(t)a Gene: is an integrated genetic and radiation hybrid (RH) mapping tool which can deal with multiple populations, including mixtures of genetic and RH data. Car(h)(t)a Gene: performs multipoint maximum likelihood estimations with accelerated expectation-maximization algorithms for some pedigrees and has sophisticated algorithms for marker ordering. Dedicated heuristics for framework mapping are also included. Car(h)(t)a Gene: can be used as a C++ library, through a shell command and a graphical interface. The XML output for companion tools is integrated.

引用

页码：1703 / 1704

页数：2

共 10 条

[1] A fast and scalable radiation hybrid map construction and integration strategy [J].